Pre_GI Gene

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Host: NC_011205 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011205:1107998 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11079981108585588hypothetical proteinBLASTP
11085941108725132hypothetical proteinBLASTP
110870911107632055hypothetical proteinBLASTP
11107631111260498hypothetical proteinBLASTP
11113181111479162hypothetical proteinBLASTP
11115211111751231hypothetical proteinBLASTP
111175111128031053hypothetical proteinBLASTP
11128001113516717hypothetical proteinBLASTP
11135131113845333hypothetical proteinBLASTP
111384211150681227hypothetical proteinBLASTP
11150521115678627hypothetical proteinBLASTP
111567511173841710side tail fiber proteinQuickGO ontologyBLASTP
11173841117965582tail fiber assembly like-proteinQuickGO ontologyBLASTP
11181121118348237hypothetical proteinBLASTP
11184431119411969secreted effector proteinQuickGO ontologyBLASTP
11200591120685627hypothetical proteinBLASTP
11206671120816150hypothetical protein
11210451121731687gifsy-2 prophage proteinQuickGO ontologyBLASTP
11220021122193192gifsy-2 prophage MsgAQuickGO ontologyBLASTP
112262011252322613aminopeptidaseQuickGO ontologyBLASTP
112544011264501011dihydroorotate dehydrogenase 2QuickGO ontologyBLASTP
11266161127158543hypothetical proteinBLASTP
112715511282641110MOSC domain-containing proteinQuickGO ontologyBLASTP
11283631130471210923S rRNA m2G2445 methyltransferaseQuickGO ontologyBLASTP