Pre_GI Gene

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Host: NC_012125 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012125:1517925 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
151792515195681644multidrug transporter membrane componentATP-binding componentQuickGO ontologyBLASTP
15197771520283507ecotinQuickGO ontologyBLASTP
15206851521176492ferredoxin-type proteinQuickGO ontologyBLASTP
15211661521429264assembly protein for periplasmic nitrate reductaseQuickGO ontologyBLASTP
152142615239122487nitrate reductase catalytic subunitQuickGO ontologyBLASTP
15239191524614696quinol dehydrogenase periplasmic componentQuickGO ontologyBLASTP
15246011525470870quinol dehydrogenase membrane componentQuickGO ontologyBLASTP
15255651526035471citrate reductase cytochrome c-type subunitQuickGO ontologyBLASTP
15260451526647603cytochrome c-type protein NapCQuickGO ontologyBLASTP
15267371527285549heme exporter proteinQuickGO ontologyBLASTP
15273151527941627heme exporter proteinQuickGO ontologyBLASTP
15279931528730738heme exporter proteinQuickGO ontologyBLASTP
15287271528939213heme exporter protein DQuickGO ontologyBLASTP
15289361529415480cytochrome c-type biogenesis protein CcmEQuickGO ontologyBLASTP
152941215313431932cytochrome c-type biogenesis proteinQuickGO ontologyBLASTP
15313401531897558heme lyase disulfide oxidoreductase cytocyhrome c-type biogenesisQuickGO ontologyBLASTP
153191215329371026heme lyase subunitQuickGO ontologyBLASTP
15329811533697717transcriptional regulator NarPQuickGO ontologyBLASTP
15343581534921564outer membrane proteinQuickGO ontologyBLASTP
15351131535535423virulence protein MsgA-like proteinQuickGO ontologyBLASTP
15356191536410792tail fiber protein of phageQuickGO ontologyBLASTP
15367071536856150bacteriophage tail fiber assembly proteinQuickGO ontologyBLASTP
153707915392652187hypothetical proteinBLASTP
15393631539500138hypothetical proteinBLASTP
1539872153994877tRNA-ProQuickGO ontologyBLASTP
154002215417821761sulfataseQuickGO ontologyBLASTP
15418141542041228hypothetical proteinBLASTP