Pre_GI: BLASTP Hits

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Query: NC_003454:2113464:2113464 Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete

Start: 2113464, End: 2116013, Length: 2550

Host Lineage: Fusobacterium nucleatum; Fusobacterium; Fusobacteriaceae; Fusobacteriales; Fusobacteria; Bacteria

General Information: Normal oral and gastrointestinal bacterium. This genus contains mostly obligately anaerobic bacilli. Many of the isolates are spindle-shaped, or fusiform. This organism belongs to the normal microflora of the human oral and gastrointestinal tracts. It is a very long and slender spindle-shaped bacillus with sharply pointed ends that is characterized by the ability to invade soft tissues. It acts as a bridge between early and late colonizers of the tooth surface, and exerts synergism with other bacteria in mixed infections. It is most frequently associated with periodontal diseases, as well as with some invasive human infections of the head and neck, chest, lung, liver and abdomen, and some anginas. One of the major amino acid and sugar fermentation pathways in Fusobacterium nucleatum produces butyric and acetic acids.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014828:1019533:1054517105451710572762760Ethanoligenens harbinense YUAN-3 chromosome, complete genomeDNA helicase0895
NC_015436:1758257:1770034177003417728682835Spirochaeta coccoides DSM 17374 chromosome, complete genomeDNA helicase0803
NC_010803:242705:2648122648122675802769Chlorobium limicola DSM 245, complete genomeDNA helicase1e-164580
NC_005090:1033746:1058201105820110606482448Wolinella succinogenes DSM 1740, complete genomeATP-BINDING PROTEIN2e-145517
NC_013508:2587913:2616477261647726191642688Edwardsiella tarda EIB202, complete genomesuperfamily I DNA and RNA helicase2e-101371
NC_013361:1335166:1353740135374013564212682Escherichia coli O26:H11 str. 11368 chromosome, complete genomeUvrD/REP helicase5e-101369
NC_013364:1306756:1325325132532513280062682Escherichia coli O111:H- str. 11128, complete genomeputative UvrD/REP helicase-like protein2e-100367
NC_006512:1722138:1728654172865417313862733Idiomarina loihiensis L2TR, complete genomeSuperfamily I DNA/RNA helicase5e-100366
NC_008570:1143578:1147784114778411504802697Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein5e-98359
NC_002655:1103991:1123332112333211254672136Escherichia coli O157:H7 EDL933, complete genomehypothetical protein7e-95348
NC_015381:2859000:2862834286283428655932760Burkholderia gladioli BSR3 chromosome 1, complete sequenceATP-binding protein1e-92341
NC_002695:1417912:1435364143536414373011938Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein7e-69262
NC_016887:1949927:1957259195725919609063648Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein1e-30135
NC_009142:2480608:2491194249119424949223729Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein2e-29131
NC_013851:3321853:3338309333830933417883480Allochromatium vinosum DSM 180 chromosome, complete genomeprotein of unknown function DUF5594e-29130
NC_015385:2135456:2135456213545621384913036Treponema succinifaciens DSM 2489 chromosome, complete genomehypothetical protein4e-27124
NC_013849:397947:4060154060154078111797Ferroglobus placidus DSM 10642 chromosome, complete genometype III restriction protein res subunit5e-24113
NC_019897:938921:9616169616169645642949Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein6e-21103
NC_013947:3080290:3088272308827230918623591Stackebrandtia nassauensis DSM 44728 chromosome, complete genomepeptidase C14 caspase catalytic subunit p203e-20101
NC_008698:903759:9088359088359107241890Thermofilum pendens Hrk 5, complete genomeAAA ATPase5e-1997.1
NC_009464:650997:6687456687456719123168Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein5e-1893.6
NC_012654:237175:2407082407082438603153Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequenceprotein kinase domain protein4e-1790.9
NC_015954:1437544:1437544143754414403212778Halophilic archaeon DL31 chromosome, complete genomeCRISPR-associated protein Cas44e-1790.9
NC_021064:793098:7930987930987949511854Propionibacterium avidum 44067, complete genomehypothetical protein2e-1688.6
NC_013929:7278414:7278414727841472823553942Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein4e-1687.4
NC_014933:3942156:3949999394999939519541956Bacteroides helcogenes P 36-108 chromosome, complete genomehelicase2e-1482
NC_018581:2768743:2789405278940527953985994Gordonia sp. KTR9 chromosome, complete genomeSuperfamily I DNA and RNA helicase and helicase subunits5e-1480.5
NC_013720:1605240:1630319163031916322381920Pirellula staleyi DSM 6068, complete genomeAAA ATPase2e-1379
NC_013222:615948:6245196245196278783360Robiginitalea biformata HTCC2501, complete genomehypothetical protein2e-1379
NC_009615:1305678:1305678130567813076001923Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase2e-1378.6
NC_014328:180482:1922491922491963344086Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein2e-1378.6
NC_013849:397947:4039154039154057801866Ferroglobus placidus DSM 10642 chromosome, complete genomeAAA ATPase3e-1378.2
NC_016609:701500:7096487096487124582811Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein4e-1377.4
NC_000961:801902:8181038181038200731971Pyrococcus horikoshii OT3, complete genomeDNA-binding protein6e-1377
NC_014640:2693060:2701831270183127035911761Achromobacter xylosoxidans A8 chromosome, complete genomesuperfamily I DNA and RNA helicases and helicase subunits-like protein1e-1276.3
NC_007950:109399:1114871114871154944008Polaromonas sp. JS666 plasmid 2, complete sequenceDNA topoisomerase1e-1276.3
NC_011750:4775770:4796684479668448002113528Escherichia coli IAI39 chromosome, complete genomeputative superfamily I DNA helicase2e-1275.5
NC_017068:2661419:2668272266827226701911920Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative DNA helicase2e-1275.1
NC_016642:471656:4748764748764816436768Pseudovibrio sp. FO-BEG1 chromosome, complete genomehypothetical protein3e-1274.7
NC_008391:2253188:2260974226097422641443171Burkholderia cepacia AMMD chromosome 2, complete sequenceDNA helicase related protein7e-1273.2
NC_006396:320853:3224483224483246732226Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceDNA binding protein eukaryotic-like1e-1172.8
NC_013410:2691437:2701566270156627047123147Fibrobacter succinogenes subsp. succinogenes S85 chromosome,Superfamily I DNA and RNA helicase and helicase subunits-like protein1e-1172.4
NC_007946:4779745:4780097478009747836123516Escherichia coli UTI89, complete genomeputative DNA helicase, superfamily I2e-1172
NC_004741:3041294:3046628304662830501433516Shigella flexneri 2a str. 2457T, complete genomeputative superfamily I DNA helicase2e-1172
NC_004337:3049118:3054452305445230579673516Shigella flexneri 2a str. 301, complete genomeputative superfamily I DNA helicase2e-1172
NC_017328:3088907:3094241309424130977563516Shigella flexneri 2002017 chromosome, complete genomeputative superfamily I DNA helicase2e-1172
NC_015761:4355335:4360324436032443638393516Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-1172
NC_011748:4792703:4802695480269548062103516Escherichia coli 55989, complete genomePutative superfamily I DNA helicase2e-1172
CU928145:4792703:4802695480269548062103516Escherichia coli 55989 chromosome, complete genomePutative superfamily I DNA helicase2e-1172
NC_008253:4735418:4737132473713247406473516Escherichia coli 536, complete genomeputative superfamily I DNA helicases2e-1171.6
NC_015164:3099097:3106738310673831109914254Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein2e-1171.6
NC_016818:4215836:4215836421583642194473612Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein3e-1171.2
NC_015556:2265940:2320628232062823238943267Pseudomonas fulva 12-X chromosome, complete genomeDNA helicase related protein3e-1171.2
NC_016822:3420826:3422873342287334263883516Shigella sonnei 53G, complete genomesuperfamily I DNA helicase4e-1170.9
NC_011595:2616861:2622022262202226252583237Acinetobacter baumannii AB307-0294, complete genomehypothetical protein4e-1170.9
NC_007384:3383983:3396289339628933998043516Shigella sonnei Ss046, complete genomeputative superfamily I DNA helicases4e-1170.9
NC_015224:610807:6146146146146164041791Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative superfamily I DNA helicase5e-1170.5
NC_016831:2667561:2698569269856927007282160Salmonella enterica subsp. enterica serovar Gallinarum/pullorumNERD domain-containing protein9e-1169.7
NC_002947:4167500:4201148420114842077716624Pseudomonas putida KT2440, complete genomeDNA helicase-related protein8e-1169.7
NC_014393:1022843:1022843102284310257462904Clostridium cellulovorans 743B chromosome, complete genomeputative DNA helicase1e-1069.3
NC_008312:3923071:3938984393898439439454962Trichodesmium erythraeum IMS101, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-like1e-1069.3
NC_015690:7785875:7838600783860078420193420Paenibacillus mucilaginosus KNP414 chromosome, complete genomeDNA helicase1e-1068.9
NC_008576:357893:3653283653283712495922Magnetococcus sp. MC-1, complete genomesuperfamily I DNA and RNA helicase and helicase subunit1e-1068.9
NC_011884:3099488:3123213312321331283815169Cyanothece sp. PCC 7425, complete genomehypothetical protein2e-1068.6
NC_007492:2203220:2209453220945322148645412Pseudomonas fluorescens PfO-1, complete genomeDNA helicase-related protein2e-1068.6
NC_015703:3880903:3893805389380539000416237Runella slithyformis DSM 19594 chromosome, complete genometranscription elongation factor GreA/GreB domain-containing protein3e-1068.2
NC_010172:480000:5091665091665153036138Methylobacterium extorquens PA1, complete genomehypothetical protein4e-1067.8
NC_015222:94847:1004471004471050844638Nitrosomonas sp. AL212 chromosome, complete genomeDNA helicase, putative3e-1067.8
NC_015311:403281:4032814032814066613381Prevotella denticola F0289 chromosome, complete genomehypothetical protein5e-1067.4
NC_009953:3509229:3512609351260935154342826Salinispora arenicola CNS-205 chromosome, complete genomeputative helicase5e-1067
NC_008268:1748635:1762421176242117677335313Rhodococcus sp. RHA1, complete genomepossible DNA helicase8e-1066.6
NC_013173:1305916:1321479132147913273585880Desulfomicrobium baculatum DSM 4028, complete genomeconserved hypothetical protein, putative DNA helicase9e-1066.2
NC_011901:1860887:1899181189918119025373357Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein1e-0965.9
NC_014298:251783:270902270902271726825Halalkalicoccus jeotgali B3 plasmid 1, complete sequenceDNA binding protein -like protein2e-0965.1
NC_015474:538544:5557295557295596193891Pyrococcus sp. NA2 chromosome, complete genomeDNA helicase related protein2e-0965.1
NC_011000:1397611:1428615142861514334864872Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein3e-0964.7
NC_015125:1668780:1668780166878016752746495Microbacterium testaceum StLB037, complete genomesuperfamily I DNA and RNA helicase and helicase subunits3e-0964.7
NC_012483:1813521:1823766182376618278334068Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein5e-0963.9
NC_015167:2498666:2505107250510725084333327Cellulophaga lytica DSM 7489 chromosome, complete genomeserine/threonine protein kinase5e-0963.9
NC_014376:3009403:3009403300940330144545052Clostridium saccharolyticum WM1 chromosome, complete genomehelicase5e-0963.9
NC_014623:2962330:2976897297689729804153519Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeprotein kinase5e-0963.9
NC_003902:2469500:2469862246986224765366675Xanthomonas campestris pv. campestris str. ATCC 33913, completeDNA helicase related protein5e-0963.9
NC_011901:1860887:1881132188113218858594728Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein7e-0963.5
NC_017378:986611:99825099825010014803231Helicobacter pylori Puno120 chromosome, complete genomehypothetical protein7e-0963.5
NC_006370:1810842:1805869180586918108454977Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical protein7e-0963.5
NC_007086:2477040:2502709250270925091796471Xanthomonas campestris pv. campestris str. 8004, complete genomeDNA helicase related protein6e-0963.5
NC_014774:1120383:1120383112038311257435361Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completehypothetical protein9e-0963.2
NC_007948:1972290:2012625201262520189156291Polaromonas sp. JS666, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-like9e-0963.2
NC_018000:4958637:4977255497725549828165562Sinorhizobium fredii USDA 257 chromosome, complete genomeATP-dependent helicase8e-0963.2
NC_016048:2678205:2686090268609026907154626Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein8e-0963.2
NC_011769:2542000:2549908254990825554935586Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeputative superfamily I DNA and RNA helicase protein8e-0963.2
NC_014365:2810405:2822643282264328290716429Desulfarculus baarsii DSM 2075 chromosome, complete genomeDNA helicase related protein8e-0963.2
NC_010943:2499092:2515987251598725193943408Stenotrophomonas maltophilia K279a, complete genomehypothetical protein1e-0862.8
NC_010803:634497:6478486478486527404893Chlorobium limicola DSM 245, complete genomesuperfamily I DNA and RNA helicase subunits-like protein1e-0862.8
NC_015711:8964410:8988065898806589915833519Myxococcus fulvus HW-1 chromosome, complete genomeprotein kinase1e-0862.8
NC_015942:3090275:3109116310911631136664551Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein1e-0862.4
NC_014727:1136589:1143692114369211507327041Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA helicase2e-0862
NC_016943:3270308:3270308327030832762265919Blastococcus saxobsidens DD2, complete genomeputative ATP-dependent helicase2e-0862
NC_013450:45782:4578245782489343153Staphylococcus aureus subsp. aureus ED98, complete genomehypothetical protein2e-0862
NC_013642:400651:4133214133214171633843Thermotoga naphthophila RKU-10, complete genomeAAA ATPase2e-0862
NC_000853:648075:6480756480756519443870Thermotoga maritima MSB8, complete genomehypothetical protein2e-0862
NC_014394:707305:7182267182267231904965Gallionella capsiferriformans ES-2 chromosome, complete genomeNERD domain-containing protein3e-0861.6
NC_013235:1218378:1233313123331312389165604Nakamurella multipartita DSM 44233, complete genomeputative superfamily I DNA and RNA helicase protein3e-0861.6
NC_016625:1259778:1265459126545912701294671Burkholderia sp. YI23 chromosome 2, complete sequenceputative DNA helicase-like protein2e-0861.6
NC_014221:2392150:2407750240775024132095460Truepera radiovictrix DSM 17093 chromosome, complete genometranscription elongation factor GreA/GreB domain protein2e-0861.6
NC_014408:806720:8067208067208115104791Methanothermobacter marburgensis str. Marburg chromosome, completeDNA helicase related protein4e-0861.2
NC_005877:198522:2033562033562071833828Picrophilus torridus DSM 9790, complete genomeDNA helicase3e-0861.2
NC_013961:2370994:2379970237997023854835514Erwinia amylovora, complete genomeSuperfamily I DNA and RNA helicase and helicase subunits-like protein3e-0861.2
NC_013971:2408522:2417498241749824230115514Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein3e-0861.2
NC_007333:810381:8395388395388440104473Thermobifida fusca YX, complete genomesimilar to Superfamily I DNA and RNA helicases and helicase subunits3e-0861.2
NC_008596:1302000:1327732132773213339086177Mycobacterium smegmatis str. MC2 155, complete genomehypothetical protein3e-0861.2
NC_010552:752007:7597217597217663146594Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceDNA helicase related protein5e-0860.8
NC_008146:861319:8663678663678727446378Mycobacterium sp. MCS, complete genomeconserved hypothetical protein, putative DNA helicase4e-0860.8
NC_008705:868623:8736718736718800486378Mycobacterium sp. KMS, complete genomeconserved hypothetical protein, putative DNA helicase4e-0860.8
NC_015740:3631326:3639493363949336442654773Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeDNA/RNA helicase4e-0860.8
NC_016629:3789554:3809766380976638149855220Desulfovibrio africanus str. Walvis Bay chromosome, completehypothetical protein4e-0860.8
NC_015216:2070756:2077641207764120828005160Methanobacterium sp. AL-21 chromosome, complete genomeDNA helicase-like protein4e-0860.8
NC_010334:2090990:2090990209099020967405751Shewanella halifaxensis HAW-EB4, complete genomehypothetical protein5e-0860.5
NC_014310:279912:2959372959373015675631Ralstonia solanacearum PSI07 megaplasmid, complete sequenceDNA helicase-like protein5e-0860.5
NC_008726:1175999:1175999117599911793643366Mycobacterium vanbaalenii PYR-1, complete genomeconserved hypothetical protein5e-0860.5
NC_009675:4281249:4290307429030742942933987Anaeromyxobacter sp. Fw109-5 chromosome, complete genomehypothetical protein6e-0860.5
NC_008751:1043269:1062386106238610682625877Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeconserved hypothetical protein, putative DNA helicase6e-0860.5
NC_014306:3006028:3017915301791530237915877Erwinia billingiae Eb661, complete genomeSuperfamily I DNA and RNA helicase subunit8e-0860.1
NC_013928:395028:3950283950283980333006Streptococcus mutans NN2025, complete genomehypothetical protein7e-0860.1
NC_009699:122000:1276781276781317304053Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein6e-0860.1
NC_013132:893849:9126829126829173614680Chitinophaga pinensis DSM 2588, complete genomeDNA/RNA helicase9e-0859.7
NC_016114:648422:6719446719446766474704Streptomyces flavogriseus ATCC 33331 chromosome, complete genomesuperfamily I DNA/RNA helicase9e-0859.7
NC_007086:2887875:2900965290096529065715607Xanthomonas campestris pv. campestris str. 8004, complete genomeDNA helicase related protein1e-0759.7
NC_015137:2582467:2596997259699726036236627Burkholderia sp. CCGE1001 chromosome 2, complete sequenceDNA helicase-like protein1e-0759.3
NC_010520:121077:1266381266381306904053Clostridium botulinum A3 str. Loch Maree, complete genomehypothetical protein2e-0758.9
NC_009495:128000:1328751328751369274053Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein2e-0758.9
NC_009697:120117:1256781256781297304053Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein2e-0758.9
NC_009698:120119:1256801256801297324053Clostridium botulinum A str. Hall chromosome, complete genomehypothetical protein2e-0758.9
NC_012563:122000:1268111268111308634053Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein2e-0758.9
NC_013947:3080290:3092360309236030977655406Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein2e-0758.9
NC_012658:125500:1303561303561344084053Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein1e-0758.9
NC_010516:127000:1326561326561367084053Clostridium botulinum B1 str. Okra, complete genomehypothetical protein1e-0758.9
NC_008942:1446682:1466548146654814712664719Methanocorpusculum labreanum Z, complete genomehypothetical protein2e-0758.5
NC_000908:160072:1758051758051791463342Mycoplasma genitalium G37, complete genomehypothetical protein2e-0758.5
NC_014210:2597000:2606406260640626100023597Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,RecB family nuclease, putative3e-0758.2
NC_017297:122383:1279431279431305312589Clostridium botulinum F str. 230613 chromosome, complete genome3e-0758.2
NC_009050:212270:2462342462342526056372Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceSuperfamily I DNA and RNA helicases and helicase subunits-like protein3e-0758.2
NC_013895:117429:1505131505131536653153Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completehypothetical protein3e-0757.8
NC_012028:451982:4730084730084812878280Halorubrum lacusprofundi ATCC 49239 chromosome 2, complete genometype III restriction protein res subunit6e-0757
NC_011761:1357799:1357799135779913643956597Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein7e-0756.6
NC_011830:693555:702221702221702907687Desulfitobacterium hafniense DCB-2, complete genome7e-0756.6
NC_012214:474359:4864154864154897533339Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein8e-0756.6
NC_014220:70490:7360573605781374533Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeprotein of unknown function DUF5599e-0756.2
NC_019974:1280500:128386912838691284354486Natronococcus occultus SP4, complete genome2e-0655.5
NC_007517:3430237:3439706343970634450785373Geobacter metallireducens GS-15, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-like2e-0655.5