Pre_GI Gene

Some Help

Host: NC_008751 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008751:1043269 Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10432691044174906ABC transporter relatedQuickGO ontologyBLASTP
104417110471883018peptidase M16 domain proteinQuickGO ontologyBLASTP
10473131048170858helix-turn-helix- domain containing protein AraC typeQuickGO ontologyBLASTP
104904710500961050Integrase catalytic regionQuickGO ontologyBLASTP
105038610531512766type III restriction enzyme res subunitQuickGO ontologyBLASTP
105315210549391788restriction modification system DNA specificity domainQuickGO ontologyBLASTP
105494310566131671SMC domain proteinQuickGO ontologyBLASTP
10566201057432813hypothetical proteinBLASTP
105744510589321488N-6 DNA methylaseQuickGO ontologyBLASTP
10589351059288354hypothetical proteinBLASTP
105966110609051245beta-lactamase domain proteinQuickGO ontologyBLASTP
10609021061855954hypothetical protein
106238610682625877conserved hypothetical protein putative DNA helicaseQuickGO ontologyBLASTP
10688591069581723hypothetical proteinBLASTP
10699311070302372hypothetical proteinBLASTP
10703081070682375hypothetical proteinBLASTP
10710451071374330phage head-tail adaptor putativeQuickGO ontologyBLASTP
10713771071940564hypothetical proteinBLASTP
107215910733821224phage major capsid protein HK97 familyQuickGO ontologyBLASTP
10733421074094753phage prohead protease HK97 familyQuickGO ontologyBLASTP
107407510753041230phage portal protein HK97 familyQuickGO ontologyBLASTP
107530110769711671phage TerminaseQuickGO ontologyBLASTP
10769711077429459phage terminase small subunit putative P27 familyQuickGO ontologyBLASTP
107754910796032055ParB domain protein nucleaseQuickGO ontologyBLASTP
10796091079962354HNH endonucleaseQuickGO ontologyBLASTP
10803271080734408transcriptional regulator MucR familyQuickGO ontologyBLASTP
10807771081310534putative cold-shock DNA-binding domain proteinQuickGO ontologyBLASTP
10813071081963657hypothetical proteinBLASTP
108209710831461050Integrase catalytic regionQuickGO ontologyBLASTP
10832641083698435nucleoside 2-deoxyribosyltransferaseQuickGO ontologyBLASTP
108385810860742217plasmidphage primase P4 familyQuickGO ontologyBLASTP