Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:7278414 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
727841472823553942hypothetical proteinBLASTP
72823627282787426hypothetical protein
72831997283825627sigma factorQuickGO ontologyBLASTP
72840957284715621hypothetical protein
72849377285248312hypothetical protein
72853617285699339hypothetical protein
72864337286948516hypothetical proteinBLASTP
72870757287953879hypothetical proteinBLASTP
72879507288135186hypothetical proteinBLASTP
728819872933725175hypothetical proteinBLASTP
729338672963913006helicaseQuickGO ontologyBLASTP
729650272978391338serinethreonine protein kinaseQuickGO ontologyBLASTP
72979797298773795hypothetical protein
729893773017712835hypothetical proteinBLASTP
73017807302400621hypothetical protein
730259873044541857ATPaseQuickGO ontologyBLASTP
730445173056471197hypothetical proteinBLASTP
73057107306342633hypothetical proteinBLASTP
730650073077531254hypothetical proteinBLASTP
73078107308676867hypothetical proteinBLASTP
730895073104551506glycosyl hydrolaseQuickGO ontologyBLASTP
731047673119241449arabinofuranosidaseQuickGO ontologyBLASTP