Pre_GI Gene

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Host: NC_018000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_018000:4958637 Sinorhizobium fredii USDA 257 chromosome, complete genome

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
495863749596741038D-xylose-binding periplasmic protein XylFQuickGO ontologyBLASTP
49596974959867171hypothetical protein
495988449612331350xylose transport system permease protein XylHQuickGO ontologyBLASTP
49612494962034786ribose import ATP-binding protein RbsAQuickGO ontologyBLASTP
4962242496231877tRNA-ArgQuickGO ontologyBLASTP
496420749653041098methylamine utilization protein MauGQuickGO ontologyBLASTP
49654414965776336hypothetical protein
49658114966377567hypothetical proteinBLASTP
496637449674621089hypothetical proteinBLASTP
496745949688681410hypothetical proteinBLASTP
49689284969044117hypothetical protein
49693704970026657nucleaseQuickGO ontologyBLASTP
49701524970838687hypothetical proteinBLASTP
49708354971272438hypothetical protein
49715204971795276hypothetical proteinBLASTP
49729724973199228hypothetical protein
497400649759521947ATP-dependent zinc metalloprotease FtsHQuickGO ontologyBLASTP
49760014976621621hypothetical proteinBLASTP
49766514976905255hypothetical protein
497725549828165562ATP-dependent helicaseQuickGO ontologyBLASTP
498298749843751389lipoproteinQuickGO ontologyBLASTP
49845634984760198hypothetical protein
49847574985164408hypothetical protein
498546749866961230hypothetical proteinBLASTP
49866934987199507hypothetical proteinBLASTP
49875074988412906periplasmic protein-like proteinQuickGO ontologyBLASTP
49884174989364948hypothetical proteinBLASTP
498943449905791146hypothetical proteinBLASTP
49905894991398810hypothetical proteinBLASTP
49916494992437789hypothetical proteinBLASTP
49925404992809270hypothetical protein
49928834993629747hypothetical proteinBLASTP
49938424994609768phosphoesteraseQuickGO ontologyBLASTP
499504049969801941ATP-dependent zinc metalloprotease FtsH 3QuickGO ontologyBLASTP
49970204997631612hypothetical proteinBLASTP
49978764998307432hypothetical protein
49985474998714168hypothetical protein