Pre_GI Gene

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Host: NC_011769 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011769:2542000 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
254214925432011053hypothetical protein
254318325444301248phosphopantothenoylcysteine decarboxylasephosphopantothenatecysteine ligaseQuickGO ontologyBLASTP
25446632545223561hypothetical proteinBLASTP
254543325466861254S-adenosylmethioninetRNA-ribosyltransferase- isomeraseQuickGO ontologyBLASTP
254703525472742404Fe-4S ferredoxin iron-sulfur binding domain proteinQuickGO ontologyBLASTP
254727925483641086pyruvate flavodoxinferredoxin oxidoreductase domain proteinQuickGO ontologyBLASTP
25483642549155792thiamine pyrophosphate protein domain protein TPP-bindingQuickGO ontologyBLASTP
25491552549697543pyruvate ferredoxinflavodoxin oxidoreductaseQuickGO ontologyBLASTP
254990825554935586putative superfamily I DNA and RNA helicase proteinQuickGO ontologyBLASTP
25557752556065291hypothetical proteinBLASTP
25564432556850408small multidrug resistance proteinQuickGO ontologyBLASTP
25568472557176330small multidrug resistance proteinQuickGO ontologyBLASTP
25574362558158723ABC transporter relatedQuickGO ontologyBLASTP
255842725596201194protein of unknown function DUF214QuickGO ontologyBLASTP
25597942560255462hypothetical proteinBLASTP
25604832560947465ybaKebsC proteinQuickGO ontologyBLASTP
256105725635732517heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP