Pre_GI Gene

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Host: NC_010803 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010803:242705 Chlorobium limicola DSM 245, complete genome

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2427052441291425hypothetical proteinBLASTP
244392245063672integrase domain protein SAM domain proteinQuickGO ontologyBLASTP
2452442462901047transposase IS4 family proteinQuickGO ontologyBLASTP
2466222529156294hypothetical proteinBLASTP
252893253594702hypothetical proteinBLASTP
254450255070621hypothetical protein
2551852565521368transposase IS4 family proteinQuickGO ontologyBLASTP
2567782582231446hypothetical protein
259062259835774IstB domain protein ATP-binding proteinQuickGO ontologyBLASTP
260724261149426nucleotidyltransferase substrate binding protein HI0074 familyQuickGO ontologyBLASTP
261146261472327DNA polymerase beta domain protein regionQuickGO ontologyBLASTP
261766262137372pyridoxamine 5-phosphate oxidase-related FMN-bindingQuickGO ontologyBLASTP
262395262820426hypothetical protein
262989263324336helix-turn-helix domain proteinQuickGO ontologyBLASTP
2633172645641248HipA domain proteinQuickGO ontologyBLASTP
2648122675802769DNA helicaseQuickGO ontologyBLASTP
267676267891216hypothetical protein
2679752695431569transposase IS4 family proteinQuickGO ontologyBLASTP