Pre_GI: OUP Neighbours

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Query: NC_011353:261220 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

D: 38.9884

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 112




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_008149:4053363Yersinia pestis Nepal516, complete genome75.4289 %Subject ←→ Query30.0006
NC_004088:266543Yersinia pestis KIM, complete genome75.432 %Subject ←→ Query30.0081
NC_016863:2721826Salmonella enterica subsp. enterica serovar Typhimurium str. UK-176.2653 %Subject ←→ Query30.7584
NC_013941:5317424Escherichia coli O55:H7 str. CB9615 chromosome, complete genome77.7053 %Subject ←→ Query30.8609
NC_011745:2025725Escherichia coli ED1a chromosome, complete genome75.9865 %Subject ←→ Query31.1649
NC_016810:2719779Salmonella enterica subsp. enterica serovar Typhimurium str76.2132 %Subject ←→ Query31.43
NC_016857:2719779Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7476.1612 %Subject ←→ Query31.43
NC_013971:666730Erwinia amylovora ATCC 49946 chromosome, complete genome76.1979 %Subject ←→ Query31.4537
NC_016856:2773995Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S76.2255 %Subject ←→ Query31.5078
NC_008563:3119284Escherichia coli APEC O1, complete genome78.0392 %Subject ←→ Query31.9127
NC_011742:4962008Escherichia coli S88 chromosome, complete genome77.5245 %Subject ←→ Query32.4611
NC_015737:2050219Clostridium sp. SY8519, complete genome75.5637 %Subject ←→ Query32.545
NC_013353:2134556*Escherichia coli O103:H2 str. 12009, complete genome79.8162 %Subject ←→ Query32.8216
NC_013892:274297Xenorhabdus bovienii SS-2004 chromosome, complete genome76.1152 %Subject ←→ Query32.8965
NC_013941:1014386Escherichia coli O55:H7 str. CB9615 chromosome, complete genome77.9841 %Subject ←→ Query33.1965
NC_007384:1763375Shigella sonnei Ss046, complete genome82.1906 %Subject ←→ Query33.4012
NC_011353:921500Escherichia coli O157:H7 str. EC4115 chromosome, complete genome78.1434 %Subject ←→ Query34.5194
NC_011741:256932Escherichia coli IAI1 chromosome, complete genome92.0282 %Subject ←→ Query34.5956
CU928160:256932Escherichia coli IAI1 chromosome, complete genome92.0282 %Subject ←→ Query34.5956
NC_013892:753307Xenorhabdus bovienii SS-2004 chromosome, complete genome75.5882 %Subject ←→ Query34.8067
NC_013364:2522888Escherichia coli O111:H- str. 11128, complete genome80.3738 %Subject ←→ Query34.9313
NC_013008:918215Escherichia coli O157:H7 str. TW14359 chromosome, complete genome79.9632 %Subject ←→ Query35.1897
NC_016831:1865681Salmonella enterica subsp. enterica serovar Gallinarum/pullorum82.3131 %Subject ←→ Query35.6576
NC_011601:756885Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome77.6256 %Subject ←→ Query35.8585
NC_013364:3312379Escherichia coli O111:H- str. 11128, complete genome75.2206 %Subject ←→ Query36.0044
NC_011094:4442478Salmonella enterica subsp. enterica serovar Schwarzengrund str75.0153 %Subject ←→ Query36.096
NC_013941:2425233Escherichia coli O55:H7 str. CB9615 chromosome, complete genome79.1605 %Subject ←→ Query36.1047
NC_011601:1077548Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome76.7463 %Subject ←→ Query36.1989
NC_013961:3083816Erwinia amylovora, complete genome77.3101 %Subject ←→ Query36.2172
NC_013216:2078444Desulfotomaculum acetoxidans DSM 771, complete genome75.6097 %Subject ←→ Query36.3627
NC_009801:3374501*Escherichia coli E24377A, complete genome75.5699 %Subject ←→ Query36.3653
NC_004431:1352906Escherichia coli CFT073, complete genome76.9945 %Subject ←→ Query36.4239
NC_002695:2158314Escherichia coli O157:H7 str. Sakai, complete genome76.6422 %Subject ←→ Query36.4725
AP010958:1472506Escherichia coli O103:H2 str. 12009 DNA, complete genome78.9062 %Subject ←→ Query36.7127
NC_013353:1472506Escherichia coli O103:H2 str. 12009, complete genome78.9062 %Subject ←→ Query36.7127
NC_011751:1377457Escherichia coli UMN026 chromosome, complete genome76.5717 %Subject ←→ Query36.813
NC_011094:638552Salmonella enterica subsp. enterica serovar Schwarzengrund str77.1048 %Subject ←→ Query36.8525
NC_013941:1963523Escherichia coli O55:H7 str. CB9615 chromosome, complete genome76.78 %Subject ←→ Query36.9893
NC_013364:863209Escherichia coli O111:H- str. 11128, complete genome79.2892 %Subject ←→ Query37.1558
NC_009648:3476000Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.4197 %Subject ←→ Query37.4593
NC_011750:1931384Escherichia coli IAI39 chromosome, complete genome75.6863 %Subject ←→ Query37.6581
NC_013361:2169948Escherichia coli O26:H11 str. 11368 chromosome, complete genome75.6127 %Subject ←→ Query37.7614
NC_016822:1839739Shigella sonnei 53G, complete genome81.7923 %Subject ←→ Query37.9198
NC_013008:1761165Escherichia coli O157:H7 str. TW14359 chromosome, complete genome78.3395 %Subject ←→ Query38.2113
NC_013361:1896446Escherichia coli O26:H11 str. 11368 chromosome, complete genome78.5233 %Subject ←→ Query38.2296
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome77.9657 %Subject ←→ Query38.4667
NC_011353:1761977Escherichia coli O157:H7 str. EC4115 chromosome, complete genome78.3058 %Subject ←→ Query38.5032
NC_011205:329155Salmonella enterica subsp. enterica serovar Dublin str. CT_0202185383.7408 %Subject ←→ Query38.7596
NC_011742:585908Escherichia coli S88 chromosome, complete genome77.7267 %Subject ←→ Query38.828
NC_013008:261226Escherichia coli O157:H7 str. TW14359 chromosome, complete genome99.9694 %Subject ←→ Query39.1965
NC_013941:261094Escherichia coli O55:H7 str. CB9615 chromosome, complete genome97.8401 %Subject ←→ Query39.1987
NC_016822:267758Shigella sonnei 53G, complete genome84.4577 %Subject ←→ Query39.2695
NC_011274:1129686Salmonella enterica subsp. enterica serovar Gallinarum str. 287/9180.9957 %Subject ←→ Query39.5488
NC_013361:1593543Escherichia coli O26:H11 str. 11368 chromosome, complete genome77.9688 %Subject ←→ Query40.2481
NC_009778:3832000Enterobacter sakazakii ATCC BAA-894, complete genome76.1826 %Subject ←→ Query45.4902
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.723 %Subject Query50.7802