Pre_GI: BLASTP Hits

Some Help

Query: NC_007954:3887488:3887488 Shewanella denitrificans OS217, complete genome

Start: 3887488, End: 3889392, Length: 1905

Host Lineage: Shewanella denitrificans; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from the Gotland Deep, an anoxic basin in the central Baltic Sea in 1986 from a depth of 120-130 m. Denitrifying marine bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella denitrificans is a vigorous denitrifier, able to convert nitrite and nitrate to nitrogen. This organism has been isolated from seawater and may play a significant role in nitrogen cycling in marine environments.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016613:2160356:2172709217270921747061998Vibrio sp. EJY3 chromosome 1, complete sequencephage terminase GpA0744
NC_017033:1052000:1075220107522010771241905Frateuria aurantia DSM 6220 chromosome, complete genomebacteriophage tail assembly protein0679
NC_011770:860944:8844368844368863911956Pseudomonas aeruginosa LESB58, complete genomePutative large subunit (GpA homolog) of DNA packaging dimer0642
NC_009832:2211154:2236048223604822379731926Serratia proteamaculans 568, complete genometerminase GpA4e-178625
NC_011750:1565000:1577290157729015792151926Escherichia coli IAI39 chromosome, complete genometerminase large subunit from bacteriophage origin3e-177622
NC_013361:2169948:2191331219133121932561926Escherichia coli O26:H11 str. 11368 chromosome, complete genometerminase large subunit3e-177622
NC_002695:2158314:2179626217962621815511926Escherichia coli O157:H7 str. Sakai, complete genomeputative terminase large subunit2e-177622
NC_011741:1668842:1671943167194316738681926Escherichia coli IAI1 chromosome, complete genomeTerminase large subunit from bacteriophage origin3e-176619
CU928160:1668842:1671943167194316738681926Escherichia coli IAI1 chromosome, complete genomeTerminase large subunit from bacteriophage origin3e-176619
NC_013941:699286:7185067185067204311926Escherichia coli O55:H7 str. CB9615 chromosome, complete genomebacteriophage tail assembly protein9e-176617
CP002185:1770815:1773916177391617758411926Escherichia coli W, complete genometerminase GpA2e-175616
NC_004431:3040953:3044054304405430459791926Escherichia coli CFT073, complete genomePutative DNA packaging protein of prophage1e-175616
NC_020181:2097066:2097066209706620988981833Enterobacter aerogenes EA1509E, complete genomePhage terminase, large subunit3e-172605
NC_002655:1909139:1909139190913919111031965Escherichia coli O157:H7 EDL933, complete genomeputative terminase large subunit of prophage CP-933O2e-169596
NC_013941:1963523:1985696198569619876601965Escherichia coli O55:H7 str. CB9615 chromosome, complete genometerminase large subunit of prophage CP-933O3e-169595
NC_013364:2522888:2556595255659525584931899Escherichia coli O111:H- str. 11128, complete genomeputative terminase large subunit3e-169595
NC_013941:5317424:5330041533004153320111971Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA packaging protein of prophage3e-169595
NC_011745:2025725:2047507204750720494921986Escherichia coli ED1a chromosome, complete genometerminase large subunit (Gp2)1e-168593
NC_011750:1931384:1953822195382219557501929Escherichia coli IAI39 chromosome, complete genometerminase large subunit (Gp2)1e-168593
NC_013941:2425233:2460001246000124619651965Escherichia coli O55:H7 str. CB9615 chromosome, complete genometerminase large subunit of prophage CP-933O1e-167590
CU928145:824367:8421208421208437811662Escherichia coli 55989 chromosome, complete genomeTerminase large subunit from bacteriophage origin7e-158557
NC_011748:824367:8421208421208437811662Escherichia coli 55989, complete genomeTerminase large subunit from bacteriophage origin7e-158557
NC_013361:3112023:3114021311402131157661746Escherichia coli O26:H11 str. 11368 chromosome, complete genome2e-155550
NC_011353:1195179:1195179119517911968731695Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-144513
NC_009783:1956000:1975306197530619772131908Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein3e-126452
NC_009801:2193000:2193020219302021949841965Escherichia coli E24377A, complete genomephage terminase large subunit (GpA)9e-119427
NC_011415:2277559:2279357227935722813211965Escherichia coli SE11 chromosome, complete genomeputative phage DNA packaging protein large subunit9e-119427
CP002797:1960000:1983314198331419850801767Escherichia coli NA114, complete genomeputative terminase large subunit DNA packaging protein1e-111404
NC_007511:1147696:1168060116806011700571998Burkholderia sp. 383 chromosome 2, complete sequencePhage terminase GpA3e-72273
NC_020126:2381380:2388233238823323900501818Myxococcus stipitatus DSM 14675, complete genomephage terminase, large subunit2e-64247
NC_014632:1112733:1134686113468611364971812Ilyobacter polytropus DSM 2926 chromosome, complete genometerminase GpA3e-62239
NC_012416:753500:7784427784427802831842Wolbachia sp. wRi, complete genometerminase large subunit, putative3e-56220
NC_002978:234082:2505152505152523411827Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage LambdaW1, terminase large subunit, putative3e-56220
NC_009253:1265474:1279777127977712816211845Desulfotomaculum reducens MI-1 chromosome, complete genomephage terminase GpA4e-56219
NC_009659:3103601:3107482310748231094431962Janthinobacterium sp. Marseille chromosome, complete genomephage terminase, large subunit2e-55218
NC_010981:242500:2582532582532600881836Wolbachia pipientis, complete genomePhage terminase large subunit GpA3e-55216
NC_010981:314745:3317733317733336081836Wolbachia pipientis, complete genomePhage terminase large subunit GpA3e-55216
NC_010981:1371265:1384424138442413862591836Wolbachia pipientis, complete genomePhage terminase large subunit GpA3e-55216
NC_012416:1079661:1101135110113511029581824Wolbachia sp. wRi, complete genomeputative phage terminase large subunit7e-54212
NC_012416:573202:5946765946765964991824Wolbachia sp. wRi, complete genomeputative phage terminase large subunit7e-54212
NC_011420:36272:5246552465544712007Rhodospirillum centenum SW, complete genomephage terminase large subunit (GpA)8e-54212
NC_002978:549454:5754605754605772831824Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage LambdaW4, terminase large subunit, putative1e-53211
NC_011958:976500:1010709101070910126671959Rhodobacter sphaeroides KD131 chromosome 2, complete genomeBacteriophage tail assembly protein1e-53211
NC_016585:417979:4378074378074398912085Azospirillum lipoferum 4B plasmid AZO_p1, complete sequenceputative Terminase large subunit GpA7e-52205
NC_016585:787498:7874987874987893631866Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencePutative phage terminase GpA8e-45182
NC_015873:1193843:1227903122790312298131911Megasphaera elsdenii DSM 20460, complete genomephage terminase large subunit (GpA)6e-42172
NC_002947:3404000:3426049342604934280852037Pseudomonas putida KT2440, complete genometerminase, large subunit, putative1e-38161
NC_010322:1336231:1353981135398113560232043Pseudomonas putida GB-1 chromosome, complete genometerminase GpA3e-37157
NC_016830:5031819:5034665503466550366772013Pseudomonas fluorescens F113 chromosome, complete genomePhage terminase, large subunit3e-37157
NC_004578:3849835:3849835384983538518592025Pseudomonas syringae pv. tomato str. DC3000, complete genometerminase, large subunit2e-36154
NC_004129:2201780:2220134222013422221852052Pseudomonas fluorescens Pf-5, complete genometerminase, large subunit3e-36154
NC_012724:3100430:3103231310323131053752145Burkholderia glumae BGR1 chromosome 1, complete genomePhage terminase large subunit (GpA)3e-28127
NC_010508:1206498:1213005121300512149241920Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceterminase GpA1e-24115
NC_007907:2534462:2536121253612125379651845Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-24114
NC_010981:314745:346157346157347029873Wolbachia pipientis, complete genomePhage terminase large subunit GpA (fragment)7e-24112
NC_017986:4091051:4108907410890741107931887Pseudomonas putida ND6 chromosome, complete genomephage terminase GpA3e-23110
NC_014011:1139818:1150223115022311520881866Aminobacterium colombiense DSM 12261 chromosome, complete genometerminase GpA5e-21103
NC_013361:2138716:2142405214240521445042100Escherichia coli O26:H11 str. 11368 chromosome, complete genometerminase large subunit1e-1791.7
NC_016612:3314846:3340032334003233421402109Klebsiella oxytoca KCTC 1686 chromosome, complete genomephage terminase large subunit6e-1789.7
NC_013008:2910567:2910567291056729125792013Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA packaging protein of prophage CP-933U8e-1789.4
NC_011353:1761977:1759857175985717619802124Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage terminase large subunit1e-1689
NC_011353:2957962:2955842295584229579652124Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage terminase large subunit1e-1689
NC_002695:2893951:2916087291608729182102124Escherichia coli O157:H7 str. Sakai, complete genomeputative terminase large subunit1e-1689
NC_011353:2892265:2910272291027229123952124Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage terminase large subunit1e-1689
NC_017243:1734179:1749339174933917512521914Brachyspira intermedia PWS/A chromosome, complete genomelarge terminase subunit2e-1687.8
NC_011353:1195179:119502511950251195228204Escherichia coli O157:H7 str. EC4115 chromosome, complete genome5e-1686.7
CU928145:1773642:1777741177774117798432103Escherichia coli 55989 chromosome, complete genomeputative DNA packaging protein of putative prophage ( terminase large subunit)2e-1378.2
NC_011748:1773642:1777741177774117798432103Escherichia coli 55989, complete genomeputative DNA packaging protein of putative prophage ( terminase large subunit)2e-1378.2
NC_011751:1859606:1863295186329518653972103Escherichia coli UMN026 chromosome, complete genomeputative DNA packaging protein2e-1378.2
NC_011740:4520373:4532433453243345345352103Escherichia fergusonii ATCC 35469, complete genomeputative DNA packaging protein of putative prophage ( terminase large subunit)2e-1377.8
NC_011094:638552:6676816676816698102130Salmonella enterica subsp. enterica serovar Schwarzengrund strphage terminase large subunit2e-1377.8
NC_011742:4962008:4974965497496549770672103Escherichia coli S88 chromosome, complete genomeDNA packaging protein of prophage ( terminase large subunit)7e-1376.3
NC_014121:1682638:1701160170116017032622103Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage terminase large subunit1e-1275.9
NC_008563:5011997:5024955502495550270572103Escherichia coli APEC O1, complete genomeputative DNA packaging protein of prophage CP-933K8e-1375.9
NC_011205:1345511:1373433137343313755742142Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage terminase large subunit3e-1273.9
NC_011740:2769961:2771693277169327738102118Escherichia fergusonii ATCC 35469, complete genomeputative DNA packaging protein of prophage ( terminase large subunit)4e-1273.9
NC_016822:1431200:1454666145466614561261461Shigella sonnei 53G, complete genomehypothetical protein5e-1273.6
NC_016831:1734292:1738044173804417400772034Salmonella enterica subsp. enterica serovar Gallinarum/pullorumLarge Subunit of Terminase5e-1273.2
NC_017047:3085000:3114079311407931160011923Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein1e-1172
NC_006138:1735723:1756863175686317588361974Desulfotalea psychrophila LSv54, complete genomesimilar to terminase large subunit of phage lambda7e-1169.7
NC_007907:2534462:2538602253860225397291128Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0964.7
NC_017047:1906000:1921137192113719232392103Rahnella aquatilis HX2 chromosome, complete genometerminase GpA6e-0963.2
NC_000913:558920:580757580757581320564Escherichia coli K12, complete genomeDLP12 prophage; predicted tail fiber assembly protein (pseudogene)7e-0859.7
AC_000091:558920:580757580757581320564Escherichia coli W3110 DNA, complete genome7e-0859.7