Pre_GI Gene

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Host: NC_011770 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011770:860944 Pseudomonas aeruginosa LESB58, complete genome

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8609448627371794putative cholesterol oxidaseQuickGO ontologyBLASTP
862869863168300hypothetical protein
8639658650141050IntegraseQuickGO ontologyBLASTP
865240865596357hypothetical protein
865601866290690hypothetical proteinBLASTP
866463866654192hypothetical protein
8667678682541488hypothetical protein
868765869349585hypothetical proteinBLASTP
869820870203384transcriptional regulator LuxR familyQuickGO ontologyBLASTP
870555871343789transcriptional regulatorQuickGO ontologyBLASTP
871763872272510EndYQuickGO ontologyBLASTP
873107873601495hypothetical protein
873714873890177hypothetical protein
874209874973765putative phage-related proteinQuickGO ontologyBLASTP
875391876269879hypothetical proteinBLASTP
876266877054789DNA replication protein DnaCQuickGO ontologyBLASTP
8770878784811395Putative DnaB-like replicative helicaseQuickGO ontologyBLASTP
878846879535690Putative metallophosphoesteraseQuickGO ontologyBLASTP
879550879810261hypothetical proteinBLASTP
879951880196246hypothetical proteinBLASTP
880514880840327DNA-binding proteinQuickGO ontologyBLASTP
88121588128773tRNA-MetQuickGO ontology
881354881686333Holin phage lambdaQuickGO ontologyBLASTP
881683882300618Predicted chitinase lytic proteinQuickGO ontologyBLASTP
882536883006471Putative lysis protein RzQuickGO ontology
883003883746744hypothetical proteinBLASTP
884141884443303Putative small subunit Nu1 homolog of DNA packaging dimerQuickGO ontologyBLASTP
8844368863911956Putative large subunit GpA homolog of DNA packaging dimerQuickGO ontologyBLASTP
8866038882491647Putative portal proteinQuickGO ontologyBLASTP
8885788903141737chaperone with DnaK heat shock proteinQuickGO ontologyBLASTP
890381890698318hypothetical proteinBLASTP
890889891491603hypothetical proteinBLASTP
891495891689195hypothetical protein
891691892443753hypothetical proteinBLASTP
892525893166642hypothetical proteinBLASTP
8936318961142484Putative tail length tape measure proteinQuickGO ontologyBLASTP
8970778983721296hypothetical proteinBLASTP
898375898785411hypothetical proteinBLASTP
898785899330546hypothetical proteinBLASTP
899341899763423hypothetical proteinBLASTP
8997509012431494hypothetical protein
901322901852531hypothetical proteinBLASTP
902041902601561hypothetical proteinBLASTP
902602902883282hypothetical protein
903430903741312hypothetical proteinBLASTP
903738903977240hypothetical protein
904050904274225hypothetical protein