Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:699286 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
699286699567282hypothetical proteinBLASTP
699578699769192hypothetical proteinBLASTP
699721700047327hypothetical proteinBLASTP
699921700601681exonuclease encoded by prophage CP-933KQuickGO ontologyBLASTP
700598701383786Bet proteinQuickGO ontologyBLASTP
701389701685297Host-nuclease inhibitor protein gamQuickGO ontologyBLASTP
701761701967207prophage Kil proteinQuickGO ontologyBLASTP
702448702825378hypothetical proteinBLASTP
7028037038641062hypothetical proteinBLASTP
703945704559615repressor proteinQuickGO ontologyBLASTP
704739704969231hypothetical proteinBLASTP
705039705578540hypothetical proteinBLASTP
7055757065941020phage replication protein OQuickGO ontologyBLASTP
706591707292702replication protein PQuickGO ontologyBLASTP
707289707591303Ren proteinQuickGO ontologyBLASTP
707659707991333EmrE SMR transporterQuickGO ontologyBLASTP
7082487097741527DLP12 prophage recombinaseQuickGO ontologyBLASTP
710239710790552phosphatidylethanolamine-binding proteinQuickGO ontologyBLASTP
710800711597798DLP12 prophage DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
711714711815102hypothetical proteinBLASTP
711812712267456hypothetical proteinBLASTP
712267712437171NinE proteinQuickGO ontologyBLASTP
712430712720291hypothetical proteinBLASTP
712717713079363Crossover junction endodeoxyribonuclease rusAQuickGO ontologyBLASTP
713076713216141hypothetical proteinBLASTP
713302713685384phage antitermination Q type 1 familyQuickGO ontologyBLASTP
7138747149561083outer membrane porin protein CQuickGO ontologyBLASTP
715501715761261hypothetical proteinBLASTP
715761716258498LysozymeQuickGO ontologyBLASTP
716243716716474Rz endopeptidase from lambdoid prophage DLP12QuickGO ontologyBLASTP
716748717041294Lambdoid prophage DLP12 Bor-like proteinQuickGO ontologyBLASTP
717986718531546bacteriophage DNA packaging proteinQuickGO ontologyBLASTP
7185067204311926bacteriophage tail assembly proteinQuickGO ontologyBLASTP
720428720634207Lambda prophage-derived head-to-tail joining protein WQuickGO ontologyBLASTP
7206317222321602capsid structural protein of prophageQuickGO ontologyBLASTP
7222137235321320minor capsid protein CQuickGO ontologyBLASTP
723536723874339head-DNA stabilization protein of prophageQuickGO ontologyBLASTP
7239037249551053phage major capsid protein EQuickGO ontologyBLASTP