Pre_GI Gene

Some Help

Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:2957962 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
295584229579652124phage terminase large subunitQuickGO ontologyBLASTP
29579622958438477bacteriophage terminase small subunitQuickGO ontologyBLASTP
29588512959318468bacteriophage lysis proteinQuickGO ontologyBLASTP
29596172960150534lysozymeQuickGO ontologyBLASTP
29601872960744558hypothetical proteinBLASTP
29607482960963216hypothetical proteinBLASTP
29610412961286246hypothetical proteinBLASTP
29613272961506180hypothetical protein
29615192961644126hypothetical protein
296164129635871947hypothetical proteinBLASTP
2964188296426679tRNA-ArgQuickGO ontology
29647952965229435antitermination protein QQuickGO ontologyBLASTP
29653152965452138hypothetical proteinBLASTP
29654522965814363endodeoxyribonuclease RUSQuickGO ontologyBLASTP
29658112966101291hypothetical proteinBLASTP
29662642966719456hypothetical proteinBLASTP
29669342967731798AraC family transcriptional regulatorQuickGO ontologyBLASTP
29679082968030123hypothetical protein
296875729702831527recombinase family proteinQuickGO ontologyBLASTP
29705402970872333multidrug efflux proteinQuickGO ontologyBLASTP
29709402971242303hypothetical proteinBLASTP
29712392971676438replication protein PQuickGO ontologyBLASTP
29717312972057327IS629 transposase orfAQuickGO ontologyBLASTP
29720542972944891IS629 transposase orfBQuickGO ontologyBLASTP
297325029742541005phage replication protein OQuickGO ontologyBLASTP
29742662974805540hypothetical proteinBLASTP
29748752975105231hypothetical proteinBLASTP
29752852975899615repressor proteinQuickGO ontologyBLASTP
297598029770411062hypothetical proteinBLASTP
29778772978083207protein KiLQuickGO ontologyBLASTP
29781592978455297host-nuclease inhibitor protein GamQuickGO ontologyBLASTP
29784612979246786phage recombination protein BetQuickGO ontologyBLASTP
29792432979920678exonucleaseQuickGO ontologyBLASTP