Pre_GI: BLASTP Hits

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Query: NC_005140:1820970:1820970 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 1820970, End: 1822430, Length: 1461

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004460:1237129:1237129123712912385681440Vibrio vulnificus CMCP6 chromosome II, complete sequencePhosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific0788
NC_008800:4013298:4028154402815440296051452Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,PTS system N-acetylmuramic acid transporter subunit IIBC2e-153542
NC_015224:3892972:3905493390549339068601368Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,N-acetylmuramic acid phosphotransfer permease8e-142504
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome5e-50199
NC_014334:99000:1147321147321167231992Lactobacillus casei str. Zhang chromosome, complete genomesucrose-specific PTS system IIBC component1e-48194
NC_003909:927955:9376899376899390531365Bacillus cereus ATCC 10987, complete genomePTS system, sucrose-specific IIBC component2e-48194
NC_008526:74500:1135971135971155881992Lactobacillus casei ATCC 334, complete genomesucrose-specific PTS system IIBC component2e-48193
NC_020272:3706722:3731411373141137327781368Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein2e-47190
NC_004193:375416:6434126434126447791368Oceanobacillus iheyensis HTE831, complete genomePTS system sucrose-specific enzyme II BC component7e-46185
NC_014106:1658103:1660123166012316620931971Lactobacillus crispatus ST1, complete genomePTS system, sucrose-specific IIBC component3e-45183
NC_008525:1013979:1033293103329310352721980Pediococcus pentosaceus ATCC 25745, complete genomesucrose-specific PTS system IIBC component2e-44180
NC_007509:832473:8324738324738340141542Burkholderia sp. 383 chromosome 3, complete sequencePhosphotransferase system PTS, EIIB/EIIC2e-41171
NC_010674:3141228:3163525316352531649461422Clostridium botulinum B str. Eklund 17B, complete genomephosphotransferase system domain protein7e-41168
NC_014751:302152:3021523021523038491698Mycoplasma leachii PG50 chromosome, complete genomeN-acetylmuramic acid phosphotransfer permease3e-38160
NC_016511:1212282:1217009121700912185261518Propionibacterium acnes TypeIA2 P.acn31 chromosome, completephosphotransferase system, EIIC4e-37156
NC_016512:1211653:1216380121638012178971518Propionibacterium acnes TypeIA2 P.acn17 chromosome, completephosphotransferase system, EIIC3e-37156
NC_014039:1238500:1243356124335612448731518Propionibacterium acnes SK137 chromosome, complete genomephosphotransferase system, EIIC5e-37155
NC_016516:1203000:1207826120782612093431518Propionibacterium acnes TypeIA2 P.acn33 chromosome, completephosphotransferase system, EIIC3e-36153
NC_006085:1234587:1241275124127512428341560Propionibacterium acnes KPA171202, complete genomePTS system, sucrose-specific IIBC component6e-36152
NC_014410:2329838:2343898234389823452711374Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,Protein-N(pi)-phosphohistidine--sugar phosphotransferase3e-32140
NC_016514:2334870:2352572235257223539421371Enterobacter cloacae EcWSU1 chromosome, complete genomePTS system sucrose-specific transporter subunit IIBC2e-25117
NC_020260:3457597:3474807347480734761771371Cronobacter sakazakii Sp291, complete genomePTS system sucrose-specific transporter subuits IIBC8e-24112
NC_015224:647341:6659026659026672721371Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,PTSsystem, sucrose-specific IIBC component6e-24112
NC_009778:3454790:3471893347189334733711479Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-24112
NC_014561:153143:1568051568051581751371Pantoea vagans C9-1 plasmid pPag1, complete sequencePTS system, sucrose-specific IIBC component5e-24112
NC_008800:614850:6334226334226347921371Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,PTSsystem sucrose-specific transporter subunit IIBC1e-23111
NC_021182:1045218:1060219106021910621321914Clostridium pasteurianum BC1, complete genomePTS system, sucrose-specific IIBC component1e-23111
NC_020064:521500:5564045564045582871884Serratia marcescens FGI94, complete genomePTS system beta-glucoside-specific IIA component, Glc family5e-22105
NC_020450:614637:6171886171886191401953Lactococcus lactis subsp. lactis IO-1 DNA, complete genomesucrose-specific phosphotransferase system, enzymeIIBCA2e-21104
NC_016023:1725294:1726555172655517285371983Bacillus coagulans 36D1 chromosome, complete genomePTS system beta-glucoside-specific transporter subunit IIABC7e-21102
NC_012704:1979183:1987975198797519900532079Corynebacterium kroppenstedtii DSM 44385, complete genomesucrose specific PTS system component5e-21102
NC_000964:4015005:4032796403279640346251830Bacillus subtilis subsp. subtilis str. 168, complete genomephosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component2e-20100
NC_006270:4048876:4048876404887640507201845Bacillus licheniformis ATCC 14580, complete genomephosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component2e-20100
NC_006322:4048990:4048990404899040508341845Bacillus licheniformis ATCC 14580, complete genomeBglP2e-20100
NC_014976:2024364:2040643204064320424721830Bacillus subtilis BSn5 chromosome, complete genomePTS beta-glucoside-specific transporter subunit IIBCA6e-2099.4
NC_014551:3797047:3800048380004838018831836Bacillus amyloliquefaciens DSM 7, complete genomephosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component6e-2099.4
NC_017188:3764061:3768269376826937701041836Bacillus amyloliquefaciens TA208 chromosome, complete genomephosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component6e-2099.4
NC_017190:3812065:3815066381506638169011836Bacillus amyloliquefaciens LL3 chromosome, complete genomephosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component6e-2099.4
NC_017191:3766960:3769961376996137717961836Bacillus amyloliquefaciens XH7 chromosome, complete genomePTS system beta-glucoside-specific transporter subunit IIBCA6e-2099.4
NC_017195:3815491:3832989383298938348181830Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completepts system beta-glucoside-specific eiibca component1e-1998.2
NC_010694:1052722:1066765106676510681411377Erwinia tasmaniensis, complete genomePTS system sucrose-specific EIIBC component (EIIBC-Scr)2e-1997.8
NC_020063:3104000:3105478310547831073521875Enterobacteriaceae bacterium strain FGI 57, complete genomePTS system beta-glucoside-specific IIB component, Glc family; PTS system beta-glucoside-specific IIA component, Glc family; PTS system beta-glucoside-1e-1895.1
NC_014622:1514416:1532764153276415346651902Paenibacillus polymyxa SC2 chromosome, complete genomebeta-glucoside-specific phosphotransferase enzyme iia component1e-1894.7
NC_004337:3590323:3842277384227738441541878Shigella flexneri 2a str. 301, complete genomePTS system beta-glucosides, enzyme II, cryptic2e-1894.4
NC_016641:3272500:3294780329478032966901911Paenibacillus terrae HPL-003 chromosome, complete genomePTS system beta-glucoside-specific transporter subunit IIABC2e-1894.4
NC_013517:1038000:1038281103828110396331353Sebaldella termitidis ATCC 33386, complete genomephosphotransferase system EIIC2e-1894
NC_014479:3825195:3854455385445538562931839Bacillus subtilis subsp. spizizenii str. W23 chromosome, completePTS system beta-glucoside-specific transporter subunit IIBCA4e-1893.2
NC_002745:487500:4974744974744989011428Staphylococcus aureus subsp. aureus N315, complete genomePTS enzyme II, phosphoenolpyruvate-dependent, trehalose-specific5e-1892.8
NC_002758:511247:5217885217885232151428Staphylococcus aureus subsp. aureus Mu50, complete genomephosphoenolpyruvate-dependent and trehalose-specific PTS enzyme II5e-1892.8
NC_009487:522193:5327345327345341611428Staphylococcus aureus subsp. aureus JH9 chromosome, completePTS system trehalose-specific transporter subunit IIBC5e-1892.8
NC_009632:522264:5328055328055342321428Staphylococcus aureus subsp. aureus JH1 chromosome, completePTS system trehalose-specific transporter subunit IIBC5e-1892.8
NC_013450:448054:4585954585954600221428Staphylococcus aureus subsp. aureus ED98, complete genomePTS system, IIBC components5e-1892.8
NC_014310:1338936:1344258134425813456551398Ralstonia solanacearum PSI07 megaplasmid, complete sequencefused trehalose(maltose)-specific pts enzyme: iib component ; iic component pts system sucrose-specific eiibc component (eiibc-scr) (eii-scr)8e-1892
NC_003923:473743:4828534828534842801428Staphylococcus aureus subsp. aureus MW2, complete genomePTS enzyme II1e-1791.7
NC_014363:480049:4800494800494820251977Olsenella uli DSM 7084 chromosome, complete genomePTS system, glucose subfamily, IIA subunit1e-1791.3
NC_013421:801542:8118838118838133071425Pectobacterium wasabiae WPP163, complete genomePTS system, trehalose-specific IIBC subunit3e-1790.5
NC_012912:844339:8593878593878613031917Dickeya zeae Ech1591, complete genomePTS system, beta-glucoside-specific IIABC subunit3e-1790.1
NC_019842:3755275:3780487378048737823221836Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,BglP3e-1790.1
NC_020410:3715210:3734628373462837364631836Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completephosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component5e-1789.7
NC_006270:4014000:4029926402992640317851860Bacillus licheniformis ATCC 14580, complete genomephosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component6e-1789.4
NC_014228:4360676:4383559438355943849921434Xenorhabdus nematophila ATCC 19061, complete genomePTS family enzyme IIBC, trehalose(maltose)-specific2e-1687.8
NC_013421:2972269:2999385299938530012861902Pectobacterium wasabiae WPP163, complete genomePTS system, beta-glucoside-specific IIABC subunit2e-1584.3
NC_010610:1765000:1786896178689617888541959Lactobacillus fermentum IFO 3956, complete genomePTS system sucrose-specific IIABC component2e-1584.3
NC_017338:470993:4808844808844823111428Staphylococcus aureus subsp. aureus JKD6159 chromosome, completePTS system trehalose-specific IIBC component2e-1584.3
NC_017337:498688:5092315092315106581428Staphylococcus aureus subsp. aureus ED133 chromosome, completePTS system transporter subunit IIBC2e-1584
NC_017243:2190000:2204248220424822056691422Brachyspira intermedia PWS/A chromosome, complete genomePTS system transporter subunit IIABC3e-1583.6
NC_020063:4170464:4186871418687141882891419Enterobacteriaceae bacterium strain FGI 57, complete genomePTS system trehalose-specific IIB component, Glc family; PTS system trehalose-specific IIC component, Glc family1e-1481.6
NC_002952:494500:5054395054395068661428Staphylococcus aureus subsp. aureus MRSA252, complete genomesugar-specific PTS transport system, IIBC component1e-1481.6
NC_016641:2291363:2296017229601722978611845Paenibacillus terrae HPL-003 chromosome, complete genomebeta-glucosides PTS, EIIBCA2e-1481.3
NC_010723:3499291:3499291349929135006461356Clostridium botulinum E3 str. Alaska E43, complete genomepts system, sucrose-specific iibc component2e-1481.3
NC_012917:2786283:2798770279877028006711902Pectobacterium carotovorum subsp. carotovorum PC1, complete genomePTS system, beta-glucoside-specific IIABC subunit2e-1481.3
NC_013714:570329:5703295703295724642136Bifidobacterium dentium Bd1, complete genomeptsG PTS system, glucose-specific IIABC component2e-1480.9
NC_012470:678661:6908626908626927241863Streptococcus equi subsp. zooepidemicus, complete genomebeta-glucoside-specific phosphotransferase system (PTS), IIABC component2e-1480.9
NC_016641:3173250:3192450319245031943541905Paenibacillus terrae HPL-003 chromosome, complete genomebeta-glucoside-specific phosphotransferase enzyme iia component3e-1480.1
NC_010473:4564590:4564590456459045660111422Escherichia coli str. K-12 substr. DH10B, complete genomefused trehalose(maltose)-specific PTS enzyme: IIB component; IIC component1e-1378.6
NC_000913:4462782:4462782446278244642031422Escherichia coli K12, complete genomefused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component1e-1378.6
NC_012947:3947238:3964651396465139660721422Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completePTS system trehalose(maltose)-specific transporter subunits IIBC9e-1478.6
NC_019978:2220863:2220863222086322222751413Halobacteroides halobius DSM 5150, complete genomePTS system, trehalose-specific IIBC component2e-1377.8
NC_008525:561000:5719755719755739301956Pediococcus pentosaceus ATCC 25745, complete genomesucrose PTS, EIIBCA3e-1377
NC_012563:811993:8276638276638295041842Clostridium botulinum A2 str. Kyoto, complete genomePTS system, beta-glucoside-specific, IIABC component3e-1377
NC_006582:3949832:3951269395126939531551887Bacillus clausii KSM-K16, complete genomePTS system, glucose-specific enzyme II, A component9e-1375.5
NC_007929:67810:8240182401843351935Lactobacillus salivarius subsp. salivarius UCC118, complete genomePTS system, sucrose-specific IIABC component2e-1274.7
NC_020995:751311:7534587534587548581401Enterococcus casseliflavus EC20, complete genomePTS system, glucose-like IIB component2e-1274.3
NC_014479:3939183:3942279394227939441471869Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative PTS system, beta-glucoside-specific IIABC component5e-1272.8
NC_016047:4108910:4113701411370141155691869Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completePTS system beta-glucoside-specific transporter subunit IIBCA8e-1272.4
NC_008800:2298000:2305196230519623070971902Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,PTS system beta-glucoside-specific IIABC component1e-1172
NC_017195:3919000:3922709392270939245681860Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completepts system beta-glucoside-specific eiibca component1e-1171.6
NC_013192:2381901:2384731238473123866291899Leptotrichia buccalis DSM 1135, complete genomePTS system, beta-glucoside-specific IIABC subunit1e-1171.2
NC_015389:175406:1855611855611869671407Coriobacterium glomerans PW2 chromosome, complete genomeProtein-N(pi)-phosphohistidine--sugarphosphotran sferase2e-1171.2
NC_015275:3761889:3775822377582237772431422Clostridium lentocellum DSM 5427 chromosome, complete genomePTS system, trehalose-specific IIBC subunit5e-1169.7
NC_016641:373623:4006564006564025151860Paenibacillus terrae HPL-003 chromosome, complete genomephosphotransferase system (pts) beta-glucoside-specific enzyme iibca component2e-1067.8
NC_020207:1346579:1386755138675513886111857Enterococcus faecium NRRL B-2354, complete genomePTS system, beta-glucoside-specific IIA, IIB, IIC component2e-1067.4
NC_015389:1858732:1863300186330018647271428Coriobacterium glomerans PW2 chromosome, complete genomeProtein-N(pi)-phosphohistidine--sugarphosphotran sferase6e-1066.2
NC_017353:152151:1718831718831739222040Staphylococcus lugdunensis N920143, complete genomePTS system glucose-specific transporter subunit IIABC8e-1065.5
NC_015389:905165:9124439124439139211479Coriobacterium glomerans PW2 chromosome, complete genomePTS system, trehalose-specific IIBC subunit2e-0963.9
NC_008541:2119883:2128001212800121298841884Arthrobacter sp. FB24 chromosome 1, complete sequencePTS system, beta-glucoside-specific IIABC subunit5e-0963.2
NC_013515:1483471:1483471148347114853121842Streptobacillus moniliformis DSM 12112, complete genomePTS system, beta-glucoside-specific IIABC subunit5e-0963.2
NC_020211:554736:5839725839725854141443Serratia marcescens WW4, complete genomecellobiose/arbutin/salicin-specific PTS system IIBC component1e-0861.6
NC_014334:1039248:1059778105977810616311854Lactobacillus casei str. Zhang chromosome, complete genomebeta-glucosides PTS, EIIBCA5e-0859.7
NC_015566:547387:5681485681485695931446Serratia sp. AS12 chromosome, complete genomeprotein-N(pi)-phosphohistidine--sugar phosphotransferase1e-0758.5
NC_015567:547500:5683345683345697791446Serratia sp. AS9 chromosome, complete genomeprotein-N(pi)-phosphohistidine--sugar phosphotransferase1e-0758.5
NC_020064:3998715:4081822408182240832791458Serratia marcescens FGI94, complete genomeglucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component1e-0758.5
NC_009089:428075:4574104574104592721863Clostridium difficile 630, complete genomePTS system, beta-glucoside-specific IIabc component1e-0758.2
NC_009832:622969:6398076398076412491443Serratia proteamaculans 568, complete genomephosphotransferase system EIIC2e-0758.2
NC_014751:772912:7991817991818007281548Mycoplasma leachii PG50 chromosome, complete genomephosphotransferase system, EIIC2e-0757.8
NC_014376:2766326:2778178277817827795481371Clostridium saccharolyticum WM1 chromosome, complete genomeProtein-N(pi)-phosphohistidine--sugar phosphotransferase3e-0757
NC_015389:1375315:1375315137531513769011587Coriobacterium glomerans PW2 chromosome, complete genome5e-0756.2
NC_014829:3822125:3847357384735738494622106Bacillus cellulosilyticus DSM 2522 chromosome, complete genomePTS system, glucose-specific IIBC subunit6e-0756.2
NC_008253:2965573:2975697297569729772261530Escherichia coli 536, complete genomePTS system, maltose and glucose-specific IIABC component2e-0654.7
NC_015061:4203767:4235157423515742366891533Rahnella sp. Y9602 chromosome, complete genomeProtein-N(pi)-phosphohistidine--sugar phosphotransferase2e-0654.7
NC_017047:4298207:4329072432907243306041533Rahnella aquatilis HX2 chromosome, complete genomeProtein-N(pi)-phosphohistidine--sugar phosphotransferase2e-0654.7
NC_004547:913553:9514089514089533421935Erwinia carotovora subsp. atroseptica SCRI1043, complete genomePTS system, IIabc component2e-0654.3
NC_010498:3023442:3033694303369430352741581Escherichia coli SMS-3-5, complete genomePTS system, maltose and glucose-specific IIBC component family protein2e-0654.3
NC_013361:3823347:3833597383359738351771581Escherichia coli O26:H11 str. 11368 chromosome, complete genomephosphotransferase system enzyme:IIB component, IIC component2e-0654.3
NC_016023:1959255:1959255195925519608621608Bacillus coagulans 36D1 chromosome, complete genomePTS system glucose-like transporter transporter subunit IIB4e-0653.1
NC_011742:3057444:3067378306737830689581581Escherichia coli S88 chromosome, complete genomePhosphotransferase system system, maltose and glucose-specific IIABC component5e-0653.1
NC_007946:3125577:3135511313551131370911581Escherichia coli UTI89, complete genomePTS system, maltose and glucose-specific IIABC component5e-0653.1
NC_013421:1038500:1052355105235510542741920Pectobacterium wasabiae WPP163, complete genomePTS system, beta-glucoside-specific IIABC subunit5e-0652.8
NC_007613:2699500:2707796270779627093761581Shigella boydii Sb227, complete genome7e-0652.4