Pre_GI Gene

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Host: NC_014106 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014106:1658103 Lactobacillus crispatus ST1, complete genome

Host Lineage: Lactobacillus crispatus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. Lactobacilli are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus crispatus is a member of the normal human oral, gastrointestinal, and genital tract microflora.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
165810316591401038hypothetical proteinBLASTP
16592001660099900N-acetylmuramic acid 6-phosphate etheraseQuickGO ontologyBLASTP
166012316620931971PTS system sucrose-specific IIBC componentQuickGO ontologyBLASTP
166232116637811461Permease of the major facilitator superfamilyQuickGO ontologyBLASTP
166380516650041200S-adenosylmethionine synthetaseQuickGO ontologyBLASTP
1665162166523473tRNA-ValQuickGO ontologyBLASTP
1665237166531175tRNA-GluQuickGO ontologyBLASTP
16654631666350888ABC-type metal ion transport system substrate binding-proteinsurface adhesinQuickGO ontologyBLASTP
1666439166652991tRNA-SerQuickGO ontologyBLASTP
1666540166661273tRNA-AsnQuickGO ontology
166662516667401165S ribosomal RNAQuickGO ontologyBLASTP
16668131669718290623S ribosomal RNAQuickGO ontologyBLASTP
16669561667273318Cell wall-associated hydrolaseQuickGO ontologyBLASTP
16686941669164471hypothetical proteinBLASTP
16699311671482155216S ribosomal RNAQuickGO ontologyBLASTP
16699991670352354hypothetical proteinBLASTP
16707861671220435PG1 protein homology to Homo sapiensQuickGO ontologyBLASTP
16712801671405126putative protein without homologyQuickGO ontologyBLASTP
1672204168286210659Mucus-binding proteinQuickGO ontologyBLASTP