Pre_GI Gene

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Host: NC_008525 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008525:1013979 Pediococcus pentosaceus ATCC 25745, complete genome

Host Lineage: Pediococcus pentosaceus; Pediococcus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Use in fermentation of food products. A distinctive characteristic of pediococci is their ability to form tetrads via cell division in two perpendicular directions in a single plane. Like other lactic acid bacteria, species of Pediococcus are acid tolerant, cannot synthesize porphyrins, and possess a strictly fermentative (homofermentative) facultatively anaerobic metabolism with lactic acid as the major metabolic end product. They also occur in such food products as cured meat, raw sausages, and marinated fish, and are are used for biotechnological processing and preservation of foods. This bacterium can be isolated from a variety of plant materials and bacterial-ripened cheeses. This organism is used as an acid producing starter culture in the fermentation of some sausages, cucumbers, green beans, soy milk, and silage. Some strains have been reported to contain several (3-5) resident plasmids that render the bacterium capable of fermenting some sugars (raffinose, melibiose, and sucrose), as well as producing bacteriocins.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10137951013989195hypothetical proteinBLASTP
101397910158771899Phage terminase-like protein large subunitQuickGO ontologyBLASTP
10158801016338459Phage terminase small subunitQuickGO ontologyBLASTP
10165351017044510Restriction endonucleaseQuickGO ontologyBLASTP
10175821018013432hypothetical proteinBLASTP
10180041018396393hypothetical protein
10184761018940465hypothetical proteinBLASTP
1018933101898048hypothetical protein
10189921019324333hypothetical protein
10193251019696372hypothetical proteinBLASTP
10197111019851141hypothetical proteinBLASTP
10198611020079219hypothetical protein
10200761020486411Holliday junction resolvaseQuickGO ontologyBLASTP
10204871020603117hypothetical protein
10206031021421819DNA replication proteinQuickGO ontologyBLASTP
10214021022145744hypothetical proteinBLASTP
10221461022823678hypothetical proteinBLASTP
10228341023232399Single-stranded DNA-binding proteinQuickGO ontologyBLASTP
10232351023891657hypothetical proteinBLASTP
10238881024349462hypothetical proteinBLASTP
10243421024443102hypothetical protein
10245751024841267hypothetical protein
10247981025055258hypothetical protein
1025055102515399hypothetical proteinBLASTP
10251531025362210hypothetical protein
1025365102545187hypothetical protein
10257071025910204hypothetical protein
10259351026135201hypothetical protein
10261811026984804Uncharacterized phage-encoded proteinQuickGO ontologyBLASTP
10270001027188189hypothetical protein
10274541027801348Transcriptional regulator xre familyQuickGO ontologyBLASTP
10279071028215309hypothetical proteinBLASTP
102827910294061128hypothetical protein
10295531029750198hypothetical protein
102997510310481074IntegraseQuickGO ontologyBLASTP
10310691031611543Predicted transcriptional regulator contains HTH domain Mga-typeQuickGO ontologyBLASTP
10318551032217363hypothetical proteinBLASTP
10323261033168843Transcriptional regulatorQuickGO ontologyBLASTP
103329310352721980sucrose-specific PTS system IIBC componentQuickGO ontologyBLASTP