Pre_GI Gene

Some Help

Host: NC_013714 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013714:570329 Bifidobacterium dentium Bd1, complete genome

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5703295724642136ptsG PTS system glucose-specific IIABC componentQuickGO ontologyBLASTP
572473573084612hypothetical protein
5732975745501254Conserved hypothetical secreted protein with presumed diacylglycerol kinase catalytic domainQuickGO ontologyBLASTP
5745645758501287serS Seryl-tRNA synthetaseQuickGO ontologyBLASTP
57608657617388tRNA-SerQuickGO ontology
576303576623321hypothetical protein
5769235790612139putative glycosidaseQuickGO ontologyBLASTP
5791305804881359Sugar-binding lipoprotein of ABC transporter systemQuickGO ontologyBLASTP
5805095815101002Sugar-binding protein of ABC transporter systemQuickGO ontologyBLASTP
581507582388882ABC transporter system sugar permeaseQuickGO ontologyBLASTP
5825245835611038LacI-type transcriptional regulatorQuickGO ontologyBLASTP
5839885850281041hypothetical proteinBLASTP
585091585195105hypothetical protein
5854465865161071hypothetical proteinBLASTP
5866345881271494Amino acid permeaseQuickGO ontologyBLASTP
5883365897001365aminotransferaseQuickGO ontologyBLASTP
589734590510777hypothetical proteinBLASTP
590785591477693Two-component response regulatorQuickGO ontologyBLASTP
5914745929581485Histidine kinase sensor of two component systemQuickGO ontologyBLASTP