Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:3761889 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
376013537618921758Xenobiotic-transporting ATPaseQuickGO ontologyBLASTP
376188937636251737Xenobiotic-transporting ATPaseQuickGO ontologyBLASTP
37637463764609864transcriptional regulator LysR familyQuickGO ontologyBLASTP
37648993765342444regulatory protein MarRQuickGO ontologyBLASTP
376536137667611401MATE efflux family proteinQuickGO ontologyBLASTP
376707137714954425hypothetical proteinBLASTP
37715133772229717hypothetical proteinBLASTP
377221937737361518hypothetical protein
377408337757201638alphaalpha-phosphotrehalaseQuickGO ontologyBLASTP
377582237772431422PTS system trehalose-specific IIBC subunitQuickGO ontologyBLASTP
37774313778168738transcriptional regulator GntR family with UTRA sensor domainQuickGO ontologyBLASTP
37784113779289879phenazine biosynthesis protein PhzF familyQuickGO ontologyBLASTP
37793863780273888cation diffusion facilitator family transporterQuickGO ontologyBLASTP
37805493781031483NADPH-dependent FMN reductaseQuickGO ontologyBLASTP
37810703781555486metal-dependent phosphohydrolase HD sub domainQuickGO ontologyBLASTP
378162337829751353Capsule synthesis protein CapAQuickGO ontologyBLASTP
37829933783811819Cof-like hydrolaseQuickGO ontologyBLASTP