Pre_GI: BLASTP Hits

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Query: NC_003198:3586000:3592550 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3592550, End: 3593512, Length: 963

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006511:4119332:413132641313264132288963Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCbiotin--protein ligase0643
NC_011750:4543135:455292745529274553892966Escherichia coli IAI39 chromosome, complete genomebiotin--protein ligase3e-169594
CU928160:4248621:426222742622274263192966Escherichia coli IAI1 chromosome, complete genomebifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase and DNA-binding transcriptional repressor, bio-5'-AMP-binding5e-169593
NC_007946:3683371:369106336910633692028966Escherichia coli UTI89, complete genomebifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor6e-169593
NC_010468:4455201:445828244582824459247966Escherichia coli ATCC 8739, complete genomebifunctional BirA, biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase2e-168592
NC_010473:4256000:427080242708024271767966Escherichia coli str. K-12 substr. DH10B, complete genomebifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase and DNA-binding transcriptional repressor, bio-5'-AMP-binding6e-168590
NC_000913:4159090:417110541711054172070966Escherichia coli K12, complete genomebiotin--protein ligase6e-168590
NC_016632:1637500:165877016587701659732963Serratia symbiotica str. 'Cinara cedri' chromosome, completebiotin--protein ligase6e-123440
NC_011184:2723000:272422527242252725184960Vibrio fischeri MJ11 chromosome I, complete sequencebiotin-(acetyl-CoA-carboxylase) ligase3e-82305
NC_007912:1173752:118056411805641181562999Saccharophagus degradans 2-40, complete genomeBiotin--(acetyl-CoA-carboxylase) ligase7e-62237
NC_002516:4747154:478747747874774788415939Pseudomonas aeruginosa PAO1, complete genomebiotin--protein ligase4e-52205
NC_011528:767940:790159790159791130972Coxiella burnetii CbuK_Q154, complete genomebiotin operon repressor2e-51203
NC_009727:1001203:102432810243281025299972Coxiella burnetii Dugway 7E9-12, complete genomebifunctional protein birA2e-51203
NC_011527:953442:976348976348977319972Coxiella burnetii CbuG_Q212, complete genomebiotin operon repressor4e-51201
NC_004344:589375:592203592203592970768Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein6e-45181
NC_005061:214168:218136218136218960825Candidatus Blochmannia floridanus, complete genomebifunctional protein: biotin operon repressor and biotin-[acetyl-CoA carboxylase] synthetase4e-44178
NC_015947:280095:283006283006283974969Burkholderia sp. JV3 chromosome, complete genomebiotin/acetyl-CoA-carboxylase ligase6e-44178
NC_014909:219498:224807224807225577771Candidatus Blochmannia vafer str. BVAF chromosome, complete genomebiotin-(acetyl-CoA-carboxylase) synthetase7e-44177
NC_008340:480399:4950814950814960911011Alkalilimnicola ehrlichei MLHE-1, complete genomebiotin--acetyl-CoA-carboxylase ligase1e-43176
NC_015731:2950874:296098829609882961977990Nitrosomonas sp. Is79A3 chromosome, complete genomebiotin/acetyl-CoA-carboxylase ligase4e-43175
NC_015964:1389628:139437213943721395286915Haemophilus parainfluenzae T3T1, complete genomebifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor, bio-5'-AMP-binding9e-43174
NC_007645:6350079:636514663651466366033888Hahella chejuensis KCTC 2396, complete genomeBiotin-(acetyl-CoA carboxylase) ligase9e-42171
NC_012560:582011:586093586093587085993Azotobacter vinelandii DJ, complete genomeBiotin--acetyl-CoA-carboxylase ligase, bifunctional protein, BirA1e-39164
NC_021150:582011:586093586093587085993Azotobacter vinelandii CA6, complete genomebiotin--protein ligase1e-39164
NC_016893:218376:239280239280240071792Wigglesworthia glossinidia endosymbiont of Glossina morsitansbiotin-[acetylCoA carboxylase] holoenzyme synthetase/DNA-binding transcriptional repressor4e-39162
NC_009922:490500:500402500402501382981Alkaliphilus oremlandii OhILAs, complete genomebiotin--acetyl-CoA-carboxylase ligase2e-34146
NC_013316:4018451:403677340367734037750978Clostridium difficile R20291, complete genomeBirA bifunctional protein [includes: biotin operon repressor and biotin--[acetyl-CoA-carboxylase] synthetase5e-34145
NC_009089:4140764:415845141584514159428978Clostridium difficile 630, complete genomeBirA bifunctional protein [includes: biotin operon repressor and biotin--[acetyl-CoA-carboxylase] synthetase9e-34144
NC_014410:615992:636077636077637057981Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,biotin/acetyl-CoA-carboxylase ligase6e-33141
NC_008789:942309:947661947661948638978Halorhodospira halophila SL1, complete genomebiotin--acetyl-CoA-carboxylase ligase7e-33141
NC_014109:393500:412673412673413329657Candidatus Riesia pediculicola USDA chromosome, complete genomebiotin-[acetyl-CoA-carboxylase] ligase7e-32137
NC_007907:225948:231384231384232364981Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-29128
NC_019903:83857:909179091791897981Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,biotin-(acetyl-CoA-carboxylase) ligase BirA7e-28124
NC_018664:2459994:248115824811582482144987Clostridium acidurici 9a chromosome, complete genomebifunctional protein biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase BirA2e-27122
NC_007503:2098980:212529321252932126279987Carboxydothermus hydrogenoformans Z-2901, complete genomeBirA bifunctional protein3e-27122
NC_007530:1459412:146990314699031470883981Bacillus anthracis str. 'Ames Ancestor', complete genomebira bifunctional protein1e-26120
NC_005945:1459357:146985714698571470837981Bacillus anthracis str. Sterne, complete genomebirA bifunctional protein1e-26120
NC_016584:85543:880248802489004981Desulfosporosinus orientis DSM 765 chromosome, complete genomebiotin-(acetyl-CoA-carboxylase) ligase BirA3e-26119
NC_014836:497350:5211065211065221161011Desulfurispirillum indicum S5 chromosome, complete genomebiotin/acetyl-CoA-carboxylase ligase6e-26118
NC_020134:2832857:2855412285541228564221011Clostridium stercorarium subsp. stercorarium DSM 8532, completebifunctional protein biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase BirA1e-25117
NC_015977:3324000:334446233444623345439978Roseburia hominis A2-183 chromosome, complete genomeputative transcriptional repressor of the biotin operon birA2e-25116
NC_011296:1542835:154283515428351543635801Thermodesulfovibrio yellowstonii DSM 11347, complete genomebiotin-[acetyl-CoA-carboxylase] ligase1e-24114
NC_010001:3369500:338309933830993384076978Clostridium phytofermentans ISDg, complete genomebiotin--acetyl-CoA-carboxylase ligase2e-23109
NC_015381:4070968:407215440721544073068915Burkholderia gladioli BSR3 chromosome 1, complete sequencebiotin--acetyl-CoA-carboxylase ligase2e-23109
NC_010730:813534:820868820868821824957Sulfurihydrogenibium sp. YO3AOP1, complete genomebiotin/acetyl-CoA-carboxylase ligase8e-23107
NC_020419:923949:928863928863929813951Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completebiotin operon repressor/biotin-[acetyl-CoA-carboxylase] ligase5e-22105
NS_000191:923949:928863928863929813951Uncultured Termite group 1 bacterium phylotype Rs-D17, completebiotin operon repressor/biotin-[acetyl-CoA-carboxylase] ligase5e-22105
NC_010080:1885677:189390018939001894889990Lactobacillus helveticus DPC 4571, complete genomeBiotin--acetyl-CoA-carboxylase ligase9e-22104
NC_014408:462195:462195462195462980786Methanothermobacter marburgensis str. Marburg chromosome, completebiotin ligase8e-22104
NC_015602:1949610:195919919591991960188990Lactobacillus kefiranofaciens ZW3 chromosome, complete genomebiotin-[acetyl-CoA-carboxylase] ligase and biotin operon repressor2e-21103
NC_018528:1932000:194260919426091943598990Lactobacillus helveticus R0052 chromosome, complete genomebiotin-[acetyl-CoA-carboxylase] ligase and biotin operon repressor2e-21103
NC_008782:4229306:424624642462464247103858Acidovorax sp. JS42, complete genomebiotin--acetyl-CoA-carboxylase ligase1e-20100
NC_011992:3550566:356662735666273567484858Acidovorax ebreus TPSY, complete genomebiotin/acetyl-CoA-carboxylase ligase1e-20100
NC_015172:775128:782332782332783330999Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomebiotin/acetyl-CoA-carboxylase ligase8e-2097.8
NC_017514:96911:1206251206251224031779Neisseria meningitidis M01-240149 chromosome, complete genomebiotin-(acetyl-CoA-carboxylase) ligase/transcriptional activator, Baf family2e-1996.7
NC_014297:1282302:130322413032241304147924Halalkalicoccus jeotgali B3 chromosome, complete genomebiotin--[acetyl-CoA-carboxylase] ligase3e-1996.3
NC_014393:4988127:500259050025905003393804Clostridium cellulovorans 743B chromosome, complete genomebiotin/acetyl-CoA-carboxylase ligase9e-1994.4
NC_011126:163878:175669175669176382714Hydrogenobaculum sp. Y04AAS1, complete genomebiotin/acetyl-CoA-carboxylase ligase2e-1893.6
NC_016938:336000:340981340981341937957Melissococcus plutonius DAT561 chromosome 1, complete genomebiotin--protein ligase4e-1892
NC_014640:6745873:674587367458736746826954Achromobacter xylosoxidans A8 chromosome, complete genomebiotin-[acetyl-CoA-carboxylase] ligase6e-1891.7
NC_011295:1218792:122744012274401228045606Coprothermobacter proteolyticus DSM 5265, complete genomebiotin-[acetyl-CoA-carboxylase] ligase3e-1789.7
NC_000917:40111:733967339674295900Archaeoglobus fulgidus DSM 4304, complete genomebiotin operon repressor/biotin--[acetyl CoA carboxylase] ligase (birA)4e-1789
NC_017955:4746441:476219947621994763023825Modestobacter marinus, complete genomebiotin-(Acetyl-CoA-carboxylase) ligase5e-1788.6
NC_007520:2128178:213523721352372135986750Thiomicrospira crunogena XCL-2, complete genomeBiotin--acetyl-CoA-carboxylase ligase3e-1686.3
NC_015516:1801500:181219218121921813166975Melissococcus plutonius ATCC 35311, complete genomebiotin-protein ligase/ biotin operon repressor5e-1685.5
NC_009515:705911:726156726156727073918Methanobrevibacter smithii ATCC 35061, complete genomebiotin-[acetyl-CoA-carboxylase] ligase/biotin operon regulator bifunctional protein, BirA1e-1584.3
NC_016052:82358:878958789588854960Tetragenococcus halophilus NBRC 12172, complete genomeputative transcriptional regulator/biotin protein ligase1e-1584
NC_014960:2111397:212663521266352127411777Anaerolinea thermophila UNI-1, complete genomebiotin--[acetyl-CoA-carboxylase] ligase2e-1480.1
NC_010376:49185:690506905069778729Finegoldia magna ATCC 29328, complete genomeputative biotin operon repressor4e-1479
NC_020207:2575808:259161325916132592581969Enterococcus faecium NRRL B-2354, complete genomeBiotin-protein ligase, Biotin operon repressor8e-1478.2
NC_008358:1789816:180126618012661802033768Hyphomonas neptunium ATCC 15444, complete genomebiotin--acetyl-CoA-carboxylase ligase1e-1377.4
NC_009614:2431005:245293324529332453700768Bacteroides vulgatus ATCC 8482 chromosome, complete genomebiotin-(acetyl-CoA carboxylase) synthetase1e-1377
NC_007797:914500:930013930013930738726Anaplasma phagocytophilum HZ, complete genomebiotin--acetyl-CoA-carboxylase ligase2e-1376.6
NC_015571:722815:738618738618739391774Porphyromonas gingivalis TDC60, complete genomebiotin--acetyl-CoA-carboxylase ligase3e-1376.3
NC_007205:841818:863300863300863863564Candidatus Pelagibacter ubique HTCC1062, complete genomebiotin-protein ligase4e-1375.9
NC_014655:1835848:183584818358481836597750Leadbetterella byssophila DSM 17132 chromosome, complete genomebiotin/acetyl-CoA-carboxylase ligase7e-1374.7
NC_015709:1459838:146277014627701463555786Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completebiotin/acetyl-CoA-carboxylase ligase8e-1374.7
NC_006085:1859191:185919118591911860030840Propionibacterium acnes KPA171202, complete genomeputative BirA bifunctional protein1e-1274.3
NC_016511:1811171:181117118111711812010840Propionibacterium acnes TypeIA2 P.acn31 chromosome, completebifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor1e-1274.3
NC_016512:1810625:181062518106251811464840Propionibacterium acnes TypeIA2 P.acn17 chromosome, completebifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor1e-1274.3
NC_016516:1799521:180208118020811802920840Propionibacterium acnes TypeIA2 P.acn33 chromosome, completebifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor1e-1274.3
NC_014774:1019273:102246110224611023219759Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completebirA bifunctional protein2e-1273.9
NC_014039:1813205:181320518132051814044840Propionibacterium acnes SK137 chromosome, complete genomebiotin-(acetyl-CoA-carboxylase) ligase2e-1273.6
NC_014654:2138794:215858521585852159439855Halanaerobium sp. 'sapolanicus' chromosome, complete genomebiotin/acetyl-CoA-carboxylase ligase6e-1272
NC_007681:1007375:104803210480321048607576Methanosphaera stadtmanae DSM 3091, complete genomepartially conserved hypothetical protein1e-1170.5
NC_000868:133451:150138150138150851714Pyrococcus abyssi GE5, complete genomebiotin--protein ligase3e-1169.7
NC_003413:1521080:155920615592061559943738Pyrococcus furiosus DSM 3638, complete genomebiotin operon repressor/biotin--[acetyl CoA carboxylase] ligase1e-1067.4
NC_013407:10953:126701267013395726Methanocaldococcus vulcanius M7, complete genomebiotin/acetyl-CoA-carboxylase ligase2e-1067
NC_013192:107672:127790127790128494705Leptotrichia buccalis DSM 1135, complete genomebiotin/acetyl-CoA-carboxylase ligase5e-0962
NC_010981:1053533:106640010664001067236837Wolbachia pipientis, complete genomebiotin-[acetyl-coa-carboxylase] ligase9e-0961.2
NC_009850:1601982:161315916131591613794636Arcobacter butzleri RM4018, complete genomebiotin--acetyl-CoA-carboxylase ligase3e-0859.7
NC_017187:1511567:152866615286661529301636Arcobacter butzleri ED-1, complete genomebiotin--protein ligase4e-0859.3
NC_004113:1137754:114219511421951142899705Thermosynechococcus elongatus BP-1, complete genomeputative biotin acetyl-CoA-carboxylase synthetase4e-0859.3
NC_017192:2114433:212877021287702129420651Arcobacter sp. L, complete genomebiotin--protein ligase2e-0756.6
NC_016931:773871:786570786570787382813Rickettsia massiliae str. AZT80 chromosome, complete genomebiotin-(acetyl-CoA carboxylase) ligase3e-0756.2
NC_008599:1489868:150781215078121508447636Campylobacter fetus subsp. fetus 82-40, complete genomebiotin-[acetyl-CoA-carboxylase] ligase4e-0755.8