Pre_GI Gene

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Host: NC_011750 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011750:4543135 Escherichia coli IAI39 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli IAI39 is a serotype O7:K1 strain from a urinary tract infection. Isolated from the urine of a patient with pyelonephritis in the 1980s in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
45431354544127993transcriptional repressor RbsRQuickGO ontologyBLASTP
454409345455201428multidrug or homocysteine efflux systemQuickGO ontologyBLASTP
45455434546235693putative transcriptional regulatorQuickGO ontologyBLASTP
454671645482571542ribosomal RNA 16SQuickGO ontologyBLASTP
4548343454841876tRNA-GluQuickGO ontology
454865145515542904ribosomal RNA 23SQuickGO ontologyBLASTP
45516484551767120ribosomal RNA 5SQuickGO ontologyBLASTP
455190245529301029UDP-N-acetylenolpyruvoylglucosamine reductaseQuickGO ontologyBLASTP
45529274553892966biotin--protein ligaseQuickGO ontologyBLASTP
45539214554871951pantothenate kinaseQuickGO ontologyBLASTP
4555233455530876tRNA-ThrQuickGO ontology
4555317455540185tRNA-TyrQuickGO ontologyBLASTP
4555518455559275tRNA-GlyQuickGO ontology
4555599455567476tRNA-ThrQuickGO ontologyBLASTP
455578945569731185elongation factor TuQuickGO ontologyBLASTP
45572034557586384preprotein translocase subunit SecEQuickGO ontologyBLASTP
45575884558133546transcription antitermination protein NusGQuickGO ontologyBLASTP
4558292455872042950S ribosomal protein L11QuickGO ontologyBLASTP
4558724455942870550S ribosomal protein L1QuickGO ontologyBLASTP
4559720456021749850S ribosomal protein L10QuickGO ontologyBLASTP
4560284456064936650S ribosomal protein L7L12QuickGO ontologyBLASTP
456096945649974029DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP