Pre_GI Gene

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Host: NC_006511 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006511:4119332 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
41193324119964633possible TetR-family trancriptional regulatory proteinQuickGO ontologyBLASTP
41199804120339360hypothetical proteinBLASTP
412038641214861101tRNA uracil-5--methyltransferaseQuickGO ontologyBLASTP
412186041237041845vitamin B12 receptor proteinQuickGO ontologyBLASTP
41236494124500852glutamate racemaseQuickGO ontologyBLASTP
41248804126420154116S ribosomal RNAQuickGO ontologyBLASTP
4126490412656374tRNA-IleQuickGO ontology
4126676412674873tRNA-AlaQuickGO ontologyBLASTP
41269344129842290923S ribosomal RNAQuickGO ontologyBLASTP
412993541300541205S ribosomal RNAQuickGO ontologyBLASTP
413030141313291029UDP-N-acetylenolpyruvoylglucosamine reductaseQuickGO ontologyBLASTP
41313264132288963biotin--protein ligaseQuickGO ontologyBLASTP
41323234133273951pantothenate kinaseQuickGO ontologyBLASTP
41334824133655174hypothetical proteinBLASTP
4133675413374773tRNA-ThrQuickGO ontology
4133759413384082tRNA-TyrQuickGO ontologyBLASTP
4133960413403172tRNA-GlyQuickGO ontology
4134041413411373tRNA-ThrQuickGO ontologyBLASTP
413423241354161185elongation factor TuQuickGO ontologyBLASTP
41356464136029384translocaseQuickGO ontologyBLASTP
41360314136576546transcription antitermination protein NusGQuickGO ontologyBLASTP
4136734413716242950S ribosomal protein L11QuickGO ontologyBLASTP