Pre_GI Gene

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Host: NC_010473 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010473:4256000 Escherichia coli str. K-12 substr. DH10B, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
42560054256114110misc_RNAQuickGO ontology
42562104257127918DNA-binding transcriptional dual regulatorQuickGO ontologyBLASTP
425711042585101401soluble pyridine nucleotide transhydrogenaseQuickGO ontologyBLASTP
42588444259491648DNA-binding transcriptional repressorQuickGO ontologyBLASTP
42594914259850360conserved inner membrane proteinQuickGO ontologyBLASTP
425989042609901101tRNA uracil-5--methyltransferaseQuickGO ontologyBLASTP
426135942632031845vitamin B12cobalamin outer membrane transporterQuickGO ontologyBLASTP
42631484264005858glutamate racemaseQuickGO ontologyBLASTP
42643794265920154216S ribosomal RNAQuickGO ontologyBLASTP
4266092426616776tRNA-GluQuickGO ontology
42663614269264290423S ribosomal RNAQuickGO ontologyBLASTP
426935742694761205S ribosomal RNAQuickGO ontologyBLASTP
426977742708051029UDP-N-acetylenolpyruvoylglucosamine reductase FAD-bindingQuickGO ontologyBLASTP
42708024271767966bifunctional biotin-acetylCoA carboxylase holoenzyme synthetase and DNA-binding transcriptional repressor bio-5-AMP-bindingQuickGO ontologyBLASTP
42717964272746951pantothenate kinaseQuickGO ontologyBLASTP
4273107427318276tRNA-ThrQuickGO ontology
4273191427327585tRNA-TyrQuickGO ontologyBLASTP
4273392427346675tRNA-GlyQuickGO ontology
4273473427354876tRNA-ThrQuickGO ontologyBLASTP
427366342748471185protein chain elongation factor EF-Tu duplicate of tufAQuickGO ontologyBLASTP
42750774275460384preprotein translocase membrane subunitQuickGO ontologyBLASTP
42754624276007546transcription termination factorQuickGO ontologyBLASTP
4276166427659442950S ribosomal subunit protein L11QuickGO ontologyBLASTP
4276598427730270550S ribosomal subunit protein L1QuickGO ontologyBLASTP
4277715427821249850S ribosomal subunit protein L10QuickGO ontologyBLASTP