Pre_GI Gene

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Host: NC_000913 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000913:4159090 Escherichia coli K12, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
41590904159794705DNA-binding transcriptional repressorQuickGO ontologyBLASTP
41597944160153360conserved inner membrane proteinQuickGO ontologyBLASTP
416019341612931101tRNA uracil-5--methyltransferaseQuickGO ontologyBLASTP
416166241635061845vitamin B12cobalamin outer membrane transporterQuickGO ontologyBLASTP
41634514164308858glutamate racemaseQuickGO ontologyBLASTP
41646824166223154216S ribosomal RNAQuickGO ontologyBLASTP
4166395416647076tRNA-GluQuickGO ontology
41666644169567290423S ribosomal RNAQuickGO ontologyBLASTP
416966041697791205S ribosomal RNAQuickGO ontologyBLASTP
417008041711081029UDP-N-acetylenolpyruvoylglucosamine reductaseQuickGO ontologyBLASTP
41711054172070966biotin--protein ligaseQuickGO ontologyBLASTP
41720994173049951pantothenate kinaseQuickGO ontologyBLASTP
4173411417348676tRNA-ThrQuickGO ontology
4173495417357985tRNA-TyrQuickGO ontologyBLASTP
4173696417377075tRNA-GlyQuickGO ontology
4173777417385276tRNA-ThrQuickGO ontologyBLASTP
417396741751511185protein chain elongation factor EF-Tu duplicate of tufAQuickGO ontologyBLASTP
41753814175764384translocaseQuickGO ontologyBLASTP
41757664176311546transcription antitermination protein NusGQuickGO ontologyBLASTP
4176470417689842950S ribosomal protein L11QuickGO ontologyBLASTP
4176902417760670550S ribosomal protein L1QuickGO ontologyBLASTP