Pre_GI: BLASTP Hits

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Query: NC_002947:5386489:5393057 Pseudomonas putida KT2440, complete genome

Start: 5393057, End: 5395420, Length: 2364

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:6224221:6246041624604162484072367Pseudomonas aeruginosa PA7 chromosome, complete genometype I restriction-modification system subunit R01453
NC_017986:1885613:1912423191242319147952373Pseudomonas putida ND6 chromosome, complete genomeEcoEI R domain-containing protein01390
NC_009512:5166459:5166459516645951688312373Pseudomonas putida F1, complete genomeEcoEI R, C-terminal domain protein01390
NC_014394:3114648:3128449312844931307972349Gallionella capsiferriformans ES-2 chromosome, complete genomeType I site-specific deoxyribonuclease01175
NC_010995:764567:7765167765167789062391Cellvibrio japonicus Ueda107, complete genometype I restriction-modification system, R subunit01149
NC_020541:2551539:2557809255780925605142706Rhodanobacter sp. 2APBS1, complete genomehelicase, type I site-specific restriction-modification system restriction subunit01048
NC_016745:1548426:1559776155977615622052430Oceanimonas sp. GK1 chromosome, complete genometype I restriction-modification system restriction01042
NC_014306:4376012:4398927439892744013622436Erwinia billingiae Eb661, complete genomeType I restriction enzyme EcoAI R protein01023
NC_014965:997344:1012394101239410148712478Vibrio vulnificus MO6-24/O chromosome I, complete sequencetype I restriction-modification system restriction subunit R01018
NC_004459:2025436:2028111202811120305552445Vibrio vulnificus CMCP6 chromosome I, complete sequenceType I restriction enzyme EcoEI R protein01014
NC_004603:370320:3934483934483958922445Vibrio parahaemolyticus RIMD 2210633 chromosome I, completetype I restriction enzyme R protein01014
NC_010814:1441327:1461750146175014641522403Geobacter lovleyi SZ, complete genomeEcoEI R domain protein01003
NC_011144:1073944:1089242108924210916892448Phenylobacterium zucineum HLK1, complete genometype I restriction-modification system, R subunit0998
NC_014655:130636:1452841452841476802397Leadbetterella byssophila DSM 17132 chromosome, complete genometype i site-specific deoxyribonuclease0992
NC_008782:2781229:2787465278746527899182454Acidovorax sp. JS42, complete genomeEcoEI R, C-terminal domain protein0989
NC_011992:1234610:1252504125250412549872484Acidovorax ebreus TPSY, complete genomeEcoEI R domain protein0971
NC_009429:401500:4239974239974264442448Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein0971
NC_014034:1418681:1421843142184314242962454Rhodobacter capsulatus SB1003 chromosome, complete genometype I restriction-modification system RcaSBIIIP subunit R0968
NC_015677:1282865:1288035128803512904852451Ramlibacter tataouinensis TTB310 chromosome, complete genometype I site-specific restriction-modification system, R subunit0963
NC_010170:4196197:4216612421661242186512040Bordetella petrii, complete genometype I restriction-modification enzyme R subunit0959
NC_009943:940835:9542409542409565912352Candidatus Desulfococcus oleovorans Hxd3, complete genomeEcoEI R domain protein0947
NC_013730:3729626:3742064374206437445052442Spirosoma linguale DSM 74, complete genomeType I site-specific deoxyribonuclease0940
NC_009925:2240871:2246217224621722485712355Acaryochloris marina MBIC11017, complete genometype I restriction-modification system, R subunit, putative0935
NC_010337:616304:6251956251956275342340Heliobacterium modesticaldum Ice1, complete genometype i restriction-modification system, r subunit0907
NC_011899:2165814:2181897218189721842092313Halothermothrix orenii H 168, complete genomeEcoEI R domain protein0896
NC_009715:1470419:1486775148677514890602286Campylobacter curvus 525.92 chromosome, complete genometype I restriction-modification system, R subunit0776
NC_014727:368698:3760893760893783952307Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,type i site-specific deoxyribonuclease restriction subunit0740
NC_009720:870194:8754428754428778172376Xanthobacter autotrophicus Py2, complete genomeEcoEI R domain-containing protein7e-174611
NC_008595:5168941:5174437517443751768002364Mycobacterium avium 104, complete genometype I restriction-modification system, R subunit1e-157557
NC_009256:277020:2984912984913008752385Burkholderia vietnamiensis G4 chromosome 1, complete sequenceEcoEI R domain-containing protein3e-153542
NC_015500:2866027:2881678288167828840742397Treponema brennaborense DSM 12168 chromosome, complete genomeType I site-specific deoxyribonuclease2e-152540
NC_019757:5748432:5756207575620757585912385Cylindrospermum stagnale PCC 7417, complete genomehelicase, type I site-specific restriction-modification system restriction subunit2e-148526
NC_015660:3174424:3185000318500031874502451Geobacillus thermoglucosidasius C56-YS93 chromosome, completetype I site-specific deoxyribonuclease2e-129463
NC_014762:890914:8957698957698981202352Sulfuricurvum kujiense DSM 16994 chromosome, complete genometype i site-specific deoxyribonuclease2e-123443
NC_019942:1270060:1304891130489113074132523Aciduliprofundum sp. MAR08-339, complete genomehelicase, type I site-specific restriction-modification system restriction subunit1e-121437
NC_015167:3469968:3481685348168534839792295Cellulophaga lytica DSM 7489 chromosome, complete genomeType I site-specific deoxyribonuclease6e-117422
NC_011761:1357799:1366160136616013684422283Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completetype I restriction-modification system, R subunit5e-114412
NC_011206:200000:2112852112852135672283Acidithiobacillus ferrooxidans ATCC 53993, complete genometype III restriction protein res subunit3e-111403
NC_013889:1740858:1755993175599317584072415Thioalkalivibrio sp. K90mix chromosome, complete genomeType I site-specific deoxyribonuclease2e-108394
NC_011145:1732499:1743021174302117453512331Anaeromyxobacter sp. K, complete genometype III restriction protein res subunit1e-108394
NC_014166:1424754:1433522143352214359302409Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeType I site-specific deoxyribonuclease4e-106386
NC_011146:4070000:4079439407943940818472409Geobacter bemidjiensis Bem, complete genometype III restriction protein res subunit3e-105383
NC_009974:53865:6562665626683252700Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU02, completetype III restriction protein res subunit2e-103377
NC_013156:226215:2450712450712475212451Methanocaldococcus fervens AG86, complete genomeType I site-specific deoxyribonuclease7e-95348
NC_009943:1499111:1500676150067615030392364Candidatus Desulfococcus oleovorans Hxd3, complete genometype III restriction protein res subunit1e-69265
NC_018876:2628966:2676295267629526786552361Methanolobus psychrophilus R15 chromosome, complete genometype III restriction protein res subunit6e-67256
NC_014098:3008951:3026314302631430281551842Bacillus tusciae DSM 2912 chromosome, complete genome2e-56221
NC_011295:1263500:1270521127052112727672247Coprothermobacter proteolyticus DSM 5265, complete genometype I restriction-modification system, R subunit1e-46188
NC_015873:63487:6495164951680703120Megasphaera elsdenii DSM 20460, complete genomehelicase C-terminal domain protein1e-44182
NC_013406:1217385:1238848123884812422013354Paenibacillus sp. Y412MC10 chromosome, complete genometype III restriction protein res subunit5e-44179
NC_014643:2056280:2059221205922120626463426Rothia dentocariosa ATCC 17931 chromosome, complete genometype I restriction-modification system R subunit1e-42175
NC_016803:593484:6049616049616083293369Desulfovibrio desulfuricans ND132 chromosome, complete genomeType I site-specific deoxyribonuclease1e-42175
NC_008346:584305:6103396103396136863348Syntrophomonas wolfei subsp. wolfei str. Goettingen, completetype I restriction-modification system R subunit (endonuclease)3e-42174
NC_008358:2638245:2689150268915026925543405Hyphomonas neptunium ATCC 15444, complete genometype I restriction-modification system, R subunit1e-41172
NC_015216:1102837:1120982112098211237172736Methanobacterium sp. AL-21 chromosome, complete genometype i site-specific deoxyribonuclease3e-41171
NC_004347:4441110:4444274444427444478403567Shewanella oneidensis MR-1, complete genometype I restriction-modification system, R subunit1e-40168
AC_000091:4569379:4587929458792945914953567Escherichia coli W3110 DNA, complete genomeendonuclease R3e-40167
NC_012759:4501206:4519756451975645233223567Escherichia coli BW2952 chromosome, complete genometype I restriction enzyme EcoKI subunit R3e-40167
NC_013967:2103968:2126758212675821289802223Haloferax volcanii DS2 chromosome, complete genometype I restriction-modification system restriction subunit3e-40167
NC_015711:8852850:8864436886443688678223387Myxococcus fulvus HW-1 chromosome, complete genometype I restriction enzyme EcoKI subunit R2e-40167
NC_010170:4196197:421497542149754215385411Bordetella petrii, complete genomepseudogene7e-40166
NC_014640:6815264:6820902682090268243573456Achromobacter xylosoxidans A8 chromosome, complete genometype III restriction enzyme, Res subunit7e-39162
NC_006510:372826:3812573812573845953339Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system R subunit (endonuclease)9e-39162
NC_015844:3159046:3161935316193531651503216Zobellia galactanivorans, complete genometype I restriction enzyme ZgaDI, R subunit1e-38162
NC_016593:416661:4237054237054270493345Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetype I restriction-modification system R subunit2e-38161
NC_012108:1664341:1683995168399516873933399Desulfobacterium autotrophicum HRM2, complete genomeHsdR12e-38160
NC_015136:2021799:2035969203596920393223354Burkholderia sp. CCGE1001 chromosome 1, complete sequenceType I site-specific deoxyribonuclease1e-37159
NC_012587:128845:1436761436761470983423Rhizobium sp. NGR234, complete genomeputative restriction endonuclease type I with R subunit / type III with Res subunit1e-37159
NC_014206:411143:4187894187894221303342Geobacillus sp. C56-T3 chromosome, complete genometype I site-specific deoxyribonuclease1e-37158
NC_015578:3495034:3504553350455335079483396Treponema primitia ZAS-2 chromosome, complete genometype I restriction-modification system R subunit1e-37158
NC_009328:814530:8346648346648379093246Geobacillus thermodenitrificans NG80-2 chromosome, complete genometype I restriction enzyme EcoKI subunit R2e-37158
NC_019897:3613830:3635423363542336387763354Thermobacillus composti KWC4 chromosome, complete genomehelicase, type I site-specific restriction-modification system restriction subunit3e-37157
NC_015737:449914:4573824573824607593378Clostridium sp. SY8519, complete genomehypothetical protein3e-37157
NC_013203:202008:2336162336162369933378Atopobium parvulum DSM 20469, complete genometype III restriction protein res subunit3e-37157
NC_009434:695582:7215787215787250513474Pseudomonas stutzeri A1501, complete genometype I restriction enzyme EcoKI subunit R4e-37157
NC_008312:3728329:3736248373624837396073360Trichodesmium erythraeum IMS101, complete genometype III restriction enzyme, res subunit3e-36154
NC_011979:3112911:3128150312815031308762727Geobacter sp. FRC-32, complete genometype III restriction protein res subunit3e-36154
NC_016593:956839:9568399568399600873249Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetype I restriction enzyme EcoKI R protein4e-36153
NC_017068:2055500:2059346205934620626783333Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction-modification system R subunit6e-36153
NC_009925:647752:6582026582026616093408Acaryochloris marina MBIC11017, complete genometype I restriction enzyme R protein1e-35152
NC_014814:2588628:2625543262554326282242682Mycobacterium sp. Spyr1 chromosome, complete genomehelicase, type I site-specific restriction-modification system restriction subunit1e-35152
NC_009338:817854:8251378251378285503414Mycobacterium gilvum PYR-GCK chromosome, complete genometype III restriction enzyme, res subunit1e-35152
NC_013720:5769910:5790098579009857928962799Pirellula staleyi DSM 6068, complete genometype III restriction protein res subunit1e-35151
NC_016027:1902854:1928603192860319319983396Gluconacetobacter xylinus NBRC 3288, complete genometype III restriction enzyme, res subunit2e-35151
NC_015703:3880903:3904133390413339073723240Runella slithyformis DSM 19594 chromosome, complete genometype I site-specific deoxyribonuclease5e-35150
NC_007908:1108494:1131262113126211346783417Rhodoferax ferrireducens T118, complete genometype III restriction enzyme, res subunit1e-34149
NC_014206:2807879:2821537282153728247793243Geobacillus sp. C56-T3 chromosome, complete genometype I site-specific deoxyribonuclease1e-34149
NC_014034:1036652:1043079104307910464863408Rhodobacter capsulatus SB1003 chromosome, complete genometype I restriction-modification system RcaSBIP subunit R1e-34148
NC_021184:207492:2274572274572306933237Desulfotomaculum gibsoniae DSM 7213, complete genomehelicase, type I site-specific restriction-modification system restriction subunit1e-34148
NC_015945:1908895:1922906192290619263913486Muricauda ruestringensis DSM 13258 chromosome, complete genomeType I site-specific deoxyribonuclease1e-34148
NC_012914:5446366:5454894545489454581453252Paenibacillus sp. JDR-2, complete genometype III restriction protein res subunit2e-34147
NC_009051:1074993:1085337108533710881742838Methanoculleus marisnigri JR1, complete genometype III restriction enzyme, res subunit2e-34147
NC_018876:1061682:1094265109426510970272763Methanolobus psychrophilus R15 chromosome, complete genometype I site-specific deoxyribonuclease1e-33145
NC_008577:2402165:2420829242082924242453417Shewanella sp. ANA-3 chromosome 1, complete sequencetype III restriction enzyme, res subunit8e-34145
NC_016803:1646342:1663058166305816658682811Desulfovibrio desulfuricans ND132 chromosome, complete genomeType I site-specific deoxyribonuclease8e-34145
NC_007645:5160133:5178827517882751823843558Hahella chejuensis KCTC 2396, complete genomeType I site-specific restriction-modification system, R (restriction) subunit and related helicase2e-33144
NC_015953:3227000:3232508323250832359693462Streptomyces sp. SirexAA-E chromosome, complete genomeType I site-specific deoxyribonuclease2e-33144
NC_018691:3437821:3451205345120534539882784Alcanivorax dieselolei B5 chromosome, complete genomeType III restriction enzyme, res subunit family4e-33143
NC_004757:2730057:2730057273005727328582802Nitrosomonas europaea ATCC 19718, complete genomeDEAD/DEAH box helicase9e-33142
NC_011138:3881446:3895467389546738988923426Alteromonas macleodii 'Deep ecotype', complete genomeType I site-specific restriction-modification system, R (restriction) subunit and related helicase1e-32142
NC_012691:1250385:1251404125140412547753372Tolumonas auensis DSM 9187, complete genometype III restriction protein res subunit1e-32142
NC_016887:3286436:3321039332103933244823444Nocardia cyriacigeorgica GUH-2, complete genomerestriction-modification system endonuclease4e-32140
NC_006361:2920028:2929350292935029327933444Nocardia farcinica IFM 10152, complete genomeputative restriction-modification system endonuclease8e-32139
NC_009720:1248866:1266535126653512699093375Xanthobacter autotrophicus Py2, complete genometype I restriction enzyme EcoKI subunit R7e-32139
NC_007925:4060635:4061871406187140652513381Rhodopseudomonas palustris BisB18, complete genometype III restriction enzyme, res subunit1e-30135
NS_000195:526983:5479945479945505192526Candidatus Cloacamonas acidaminovoranshypothetical protein3e-30134
NC_013959:1059004:1069825106982510723682544Sideroxydans lithotrophicus ES-1 chromosome, complete genometype III restriction protein res subunit5e-30133
NC_016612:2009927:2035784203578420391973414Klebsiella oxytoca KCTC 1686 chromosome, complete genometype III restriction enzyme, res subunit2e-29132
CP002185:4750571:4763293476329347667063414Escherichia coli W, complete genometype III restriction enzyme, res subunit1e-29132
CP002516:4236680:4246163424616342495763414Escherichia coli KO11, complete genometype III restriction protein res subunit1e-29132
NC_016902:4236680:4246163424616342495763414Escherichia coli KO11FL chromosome, complete genometype III restriction protein res subunit1e-29132
NC_011083:4547825:4593159459315945965723414Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III restriction enzyme, res subunit1e-29132
NC_020211:554736:5749865749865783993414Serratia marcescens WW4, complete genomeendonuclease R Type I restriction enzyme1e-29132
NC_012917:3241196:3255289325528932587023414Pectobacterium carotovorum subsp. carotovorum PC1, complete genometype III restriction protein res subunit8e-30132
NC_016943:4799915:4812303481230348150712769Blastococcus saxobsidens DD2, complete genomeRestriction modification system, restriction subunit3e-29130
NC_012962:4591295:4591295459129545947083414Photorhabdus asymbiotica, complete genomehypothetical protein9e-29129
NC_008751:1043269:1050386105038610531512766Desulfovibrio vulgaris subsp. vulgaris DP4, complete genometype III restriction enzyme, res subunit8e-29129
NC_014217:2760898:2787205278720527899432739Starkeya novella DSM 506 chromosome, complete genometype III restriction protein res subunit4e-28127
NC_011071:1178423:1182895118289511862753381Stenotrophomonas maltophilia R551-3, complete genometype III restriction protein res subunit1e-27125
NC_016610:2077603:2089350208935020920612712Tannerella forsythia ATCC 43037 chromosome, complete genomehelicase C-terminal domain-containing protein6e-27123
NC_014363:1902868:1916052191605219187932742Olsenella uli DSM 7084 chromosome, complete genometype III restriction protein res subunit6e-27123
NC_008146:4019711:4031427403142740338382412Mycobacterium sp. MCS, complete genometype III restriction enzyme, res subunit5e-27123
NC_008705:4053070:4065909406590940683202412Mycobacterium sp. KMS, complete genometype III restriction enzyme, res subunit5e-27123
NC_019977:302454:3126153126153153712757Methanomethylovorans hollandica DSM 15978, complete genomehelicase, type I site-specific restriction-modification system restriction subunit1e-25119
NC_011832:913994:9275799275799302602682Candidatus Methanosphaerula palustris E1-9c, complete genome5e-25117
NC_015601:627217:6340726340726356611590Erysipelothrix rhusiopathiae str. Fujisawa, complete genomeDNA/RNA helicase9e-25115
NC_011898:3824000:3853810385381038554201611Clostridium cellulolyticum H10, complete genometype III restriction protein res subunit1e-23112
NC_009712:1008000:1010105101010510127862682Candidatus Methanoregula boonei 6A8, complete genometype III restriction enzyme, res subunit2e-23111
NC_014376:1472304:1478955147895514805381584Clostridium saccharolyticum WM1 chromosome, complete genometype III restriction protein res subunit1e-21105
NC_009617:3263413:3271545327154532740822538Clostridium beijerinckii NCIMB 8052 chromosome, complete genometype III restriction protein, res subunit5e-21103
NC_008699:2418722:2428895242889524305711677Nocardioides sp. JS614, complete genometype III restriction enzyme, res subunit4e-20100
NC_015660:3328595:3328595332859533314592865Geobacillus thermoglucosidasius C56-YS93 chromosome, completetype III restriction protein res subunit2e-1998.6
NC_008536:2079052:2116466211646621181781713Solibacter usitatus Ellin6076, complete genometype III restriction enzyme, res subunit4e-1997.4
NC_015275:309133:3131023131023159812880Clostridium lentocellum DSM 5427 chromosome, complete genomeProtein of unknown function DUF34275e-1997.1
NC_013131:1593840:1605167160516716068371671Catenulispora acidiphila DSM 44928, complete genometype III restriction protein res subunit9e-1995.9
NC_014624:1675500:1676158167615816779691812Eubacterium limosum KIST612 chromosome, complete genomeDNA or RNA helicases of superfamily II3e-1894.4
NC_002737:533291:5375715375715391541584Streptococcus pyogenes M1 GAS, complete genomeputative DEAD box family helicase, phage associated4e-1894
NC_009337:89631:9038190381920511671Chlorobium phaeovibrioides DSM 265 chromosome, complete genometype III restriction enzyme, res subunit6e-1893.6
NC_014206:1467000:1468175146817514706312457Geobacillus sp. C56-T3 chromosome, complete genometype III restriction protein res subunit5e-1893.6
NC_013411:2975364:2998057299805730005042448Geobacillus sp. Y412MC61, complete genometype III restriction protein res subunit5e-1893.6
NC_014915:2092678:2137988213798821404352448Geobacillus sp. Y412MC52 chromosome, complete genometype III restriction protein res subunit5e-1893.6
NC_013757:3897413:3904713390471339078203108Geodermatophilus obscurus DSM 43160, complete genometype III restriction protein res subunit1e-1792.4
NC_012793:383612:4080904080904112513162Geobacillus sp. WCH70, complete genometype III restriction protein res subunit1e-1792
NC_009328:2083386:2126131212613121285782448Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeDNA/RNA helicase2e-1791.7
NC_010803:1436397:1441999144199914449022904Chlorobium limicola DSM 245, complete genometype III restriction protein res subunit4e-1790.9
NC_016112:1330500:1337935133793513401662232Methylomicrobium alcaliphilum chromosome, complete genomehypothetical protein3e-1790.9
NC_007298:2856104:2890657289065728921711515Dechloromonas aromatica RCB, complete genomeHelicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal1e-1689
NC_012815:669436:6764596764596795843126Bifidobacterium animalis subsp. lactis DSM 10140, complete genomesuperfamily II DNA/RNA helicase2e-1688.6
NC_012814:669434:6764576764576795823126Bifidobacterium animalis subsp. lactis Bl-04, complete genomesuperfamily II DNA/RNA helicase2e-1688.6
NC_017214:1304774:1311796131179613149213126Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeDNA/RNA helicase2e-1688.6
NC_017215:669358:6763816763816795063126Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Hydrolase acting on acid anhydrides in phosphorous-containing anhydrides2e-1688.6
NC_017216:669296:6763196763196794443126Bifidobacterium animalis subsp. lactis BLC1, complete genomesuperfamily II DNA-RNA helicase2e-1688.6
NC_017217:669437:6764606764606795853126Bifidobacterium animalis subsp. lactis V9 chromosome, completesuperfamily II DNA/RNA helicase2e-1688.6
NC_011835:1395716:1402802140280214058643063Bifidobacterium animalis subsp. lactis AD011 chromosome, completeDNA or RNA helicase of superfamily II2e-1688.6
NC_002939:1480474:1484238148423814873633126Geobacter sulfurreducens PCA, complete genomehelicase, putative2e-1688.2
NC_012563:811993:8127918127918157572967Clostridium botulinum A2 str. Kyoto, complete genome4e-1687.4
NC_006814:51500:5407154071569202850Lactobacillus acidophilus NCFM, complete genomeputative phage DEAD box family helicase5e-1687
NC_013169:1759900:1766874176687417699693096Kytococcus sedentarius DSM 20547, complete genomeDNA/RNA helicase, superfamily II5e-1687
NC_010545:83353:9547095470983792910Corynebacterium urealyticum DSM 7109, complete genomeputative helicase5e-1687
NC_012846:929570:9295709295709344804911Bartonella grahamii as4aup, complete genomehelicase/methyltransferase5e-1687
NC_013165:1294000:1300818130081813037422925Slackia heliotrinireducens DSM 20476, complete genomeDNA/RNA helicase, superfamily II8e-1686.3
NC_018528:65000:6768467684705152832Lactobacillus helveticus R0052 chromosome, complete genomeDNA/RNA helicase8e-1686.3
NC_014215:421683:4300964300964332603165Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Putative carboxylic ester hydrolase1e-1585.9
NC_011147:682897:7047587047587065181761Salmonella enterica subsp. enterica serovar Paratyphi A strhelicase1e-1585.9
NC_006511:682863:7048127048127065721761Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative helicase1e-1585.9
NC_021177:2766910:2773012277301227761493138Streptomyces fulvissimus DSM 40593, complete genomeATP-dependent helicase1e-1585.5
NC_010556:316996:3224273224273247512325Exiguobacterium sibiricum 255-15, complete genometype III restriction protein res subunit1e-1585.5
NC_010080:69000:7123071230740612832Lactobacillus helveticus DPC 4571, complete genomeputative phage DEAD box family helicase2e-1585.5
NC_015214:48999:5073950739535642826Lactobacillus acidophilus 30SC chromosome, complete genomephage DEAD box family helicase2e-1585.1
NC_016863:2324293:2324293232429323260531761Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative ATP-dependent helicase2e-1585.1
NC_016111:3577572:3586386358638635895293144Streptomyces cattleya NRRL 8057, complete genomeATP-dependent helicase2e-1585.1
NC_014724:59000:5994359943627682826Lactobacillus amylovorus GRL 1112 chromosome, complete genomephage DEAD box family helicase2e-1585.1
NC_010067:660659:6802536802536820131761Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1584.7
NC_009675:4644173:4644173464417346484294257Anaeromyxobacter sp. Fw109-5 chromosome, complete genometype III restriction protein res subunit3e-1584.7
NC_012108:4454705:4456089445608944592113123Desulfobacterium autotrophicum HRM2, complete genomeRecQ13e-1584.7
NC_015566:3622385:3622385362238536241421758Serratia sp. AS12 chromosome, complete genometype III restriction protein res subunit3e-1584.7
NC_015953:2603526:2611843261184326149833141Streptomyces sp. SirexAA-E chromosome, complete genometype III restriction protein res subunit3e-1584.3
NC_020064:3157656:3158630315863031603871758Serratia marcescens FGI94, complete genomeDNA/RNA helicase, superfamily II4e-1584
NC_009952:997950:1017620101762010204362817Dinoroseobacter shibae DFL 12, complete genometype III restriction protein res subunit4e-1584
NC_012846:1778443:1797703179770318026804978Bartonella grahamii as4aup, complete genome4e-1584
NC_012846:1952178:1969434196943419744104977Bartonella grahamii as4aup, complete genome4e-1584
NC_008054:1502210:1521724152172415248583135Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative helicase4e-1584
NC_010102:683444:7195017195017212611761Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-1583.6
NC_015602:1810500:1813312181331218161372826Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeDNA/RNA helicase, DEAD/DEAH box family1e-1482.4
NC_012108:4454705:4468235446823544714653231Desulfobacterium autotrophicum HRM2, complete genomeHsdR31e-1482.4
NC_006814:403723:4208604208604234542595Lactobacillus acidophilus NCFM, complete genomephage related helicase1e-1482.4
NC_013971:2408522:2409415240941524111691755Erwinia amylovora ATCC 49946 chromosome, complete genomeDNA helicase1e-1482.4
NC_013961:2370994:2371887237188723736411755Erwinia amylovora, complete genomeUncharacterized protein yejH1e-1482.4
NC_008529:1514000:1540192154019215433323141Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA or RNA helicase of superfamily II2e-1482
NC_021177:7462000:7476379747637974792732895Streptomyces fulvissimus DSM 40593, complete genomeType III restriction enzyme, res subunit2e-1481.6
NC_005139:2201820:2204823220482322076152793Vibrio vulnificus YJ016 chromosome I, complete sequenceDNA or RNA helicase2e-1481.6
NC_009051:419929:4323924323924355803189Methanoculleus marisnigri JR1, complete genometype III restriction enzyme, res subunit5e-1480.5
NC_020272:162779:1687481687481718793132Bacillus amyloliquefaciens IT-45, complete genomeATP-dependent RNA helicase5e-1480.1
NC_014106:54587:5609556095589232829Lactobacillus crispatus ST1, complete genomeDNA/RNA helicase, DEAD/DEAH box family6e-1480.1
NC_019902:3397170:3397170339717034012584089Thioalkalivibrio nitratireducens DSM 14787, complete genomeHelicase-related protein6e-1480.1
NC_019897:2908971:2928416292841629316283213Thermobacillus composti KWC4 chromosome, complete genomeDNA/RNA helicase7e-1479.7
NC_013222:3098409:3117822311782231193121491Robiginitalea biformata HTCC2501, complete genomeputative helicase8e-1479.7
NC_012668:2744393:2793995279399527969312937Vibrio cholerae MJ-1236 chromosome 1, complete sequencehelicase-related protein2e-1379
NC_016445:338288:3443723443723473082937Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehelicase-related protein2e-1379
NC_016944:859492:8638928638928668282937Vibrio cholerae IEC224 chromosome I, complete sequencehelicase-like protein2e-1379
NC_015634:2595500:2604826260482626077142889Bacillus coagulans 2-6 chromosome, complete genometype III restriction protein res subunit2e-1378.6
NC_012582:882931:8890158890158919542940Vibrio cholerae O395 chromosome chromosome I, complete sequencehelicase-related protein2e-1378.6
NC_009457:351512:3575963575963605352940Vibrio cholerae O395 chromosome 2, complete sequenceDEAD/DEAH box helicase2e-1378.6
NC_012578:818241:8243258243258272642940Vibrio cholerae M66-2 chromosome I, complete sequencehelicase-like protein2e-1378.6
NC_002505:860789:8668738668738698122940Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehelicase-related protein2e-1378.6
NC_003888:3111998:3118362311836231211992838Streptomyces coelicolor A3(2), complete genomehelicase2e-1378.2
NC_018678:87064:98404984041016973294Alteromonas macleodii str. 'English Channel 673' chromosome,type III restriction protein res subunit3e-1378.2
NC_003155:6295078:6305198630519863081192922Streptomyces avermitilis MA-4680, complete genomeATP-dependent helicase4e-1377.4
NC_017167:1648913:1791053179105317928701818Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1type III restriction protein res subunit5e-1377
NC_014618:1593360:1609002160900216107621761Enterobacter cloacae SCF1 chromosome, complete genometype III restriction protein res subunit6e-1376.6
NC_007954:334795:3347953347953379503156Shewanella denitrificans OS217, complete genometype III restriction enzyme, res subunit7e-1376.6
NC_012917:1840172:1885051188505118868111761Pectobacterium carotovorum subsp. carotovorum PC1, complete genometype III restriction protein res subunit1e-1275.9
NC_012918:928903:9740289740289771563129Geobacter sp. M21 chromosome, complete genometype III restriction protein res subunit1e-1275.9
NC_002953:2541264:2541264254126425441252862Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative helicase1e-1275.9
NC_007795:2561928:2561928256192825647892862Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein1e-1275.9
NC_009641:2619759:2619759261975926226202862Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein1e-1275.9
NC_016928:2517691:2517691251769125198502160Staphylococcus aureus subsp. aureus M013 chromosome, completeDNA/RNA helicase of DEAD/DEAH box family2e-1275.5
NC_009050:212270:2299552299552327412787Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequencetype III restriction enzyme, res subunit2e-1275.5
NC_015214:437733:4544914544914573882898Lactobacillus acidophilus 30SC chromosome, complete genomephage related helicase1e-1275.5
NC_003923:2561953:2561953256195325648082856Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein1e-1275.5
NC_017343:2474743:2474743247474324776042862Staphylococcus aureus subsp. aureus ECT-R 2, complete genometype III restriction enzyme, res subunit2e-1275.1
NC_016112:1330500:1332673133267313355762904Methylomicrobium alcaliphilum chromosome, complete genomeDNA/RNA helicase2e-1274.7
NC_007164:62816:6655466554691452592Corynebacterium jeikeium K411, complete genomeputative helicase3e-1274.7
NC_017167:2298962:2362062236206223638821821Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1type III restriction protein res subunit5e-1273.9
NC_010162:11387949:1140531711405317114077432427Sorangium cellulosum 'So ce 56', complete genomehelicase-related protein5e-1273.9
NC_015576:612164:6653886653886684893102Mycobacterium sp. JDM601 chromosome, complete genometype III restriction enzyme res subunit4e-1273.9
NC_002952:2653482:2653482265348226563432862Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative helicase4e-1273.9
NC_005363:3562205:3562205356220535639471743Bdellovibrio bacteriovorus HD100, complete genomeputative ATP-dependent helicase4e-1273.9
NC_010524:4788753:4798140479814048013163177Leptothrix cholodnii SP-6, complete genometype III restriction protein res subunit7e-1273.2
NC_013205:526281:5456155456155474351821Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,type III restriction protein res subunit8e-1273.2
NC_014550:3534000:3542683354268335456702988Arthrobacter arilaitensis Re117, complete genomeputative ATP-dependent helicase8e-1273.2
NC_013205:1123280:1143953114395311457761824Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,type III restriction protein res subunit8e-1272.8
NC_016941:2498299:2498299249829925011602862Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative helicase9e-1272.8
NC_018691:1322389:1338303133830313399791677Alcanivorax dieselolei B5 chromosome, complete genomeDNA/RNA helicase1e-1172.4
NC_009429:401500:4185044185044213742871Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completetransposase, IS4 family protein1e-1172.4
NC_009675:4644173:4668098466809846721444047Anaeromyxobacter sp. Fw109-5 chromosome, complete genometype III restriction protein res subunit1e-1172.4
NC_008541:1042322:1051193105119310543843192Arthrobacter sp. FB24 chromosome 1, complete sequencetype III restriction enzyme, res subunit2e-1172
NC_015434:1173794:1180675118067511837493075Verrucosispora maris AB-18-032 chromosome, complete genometype iii restriction protein res subunit2e-1172
NC_011891:4450031:4468556446855644716573102Anaeromyxobacter dehalogenans 2CP-1, complete genometype III restriction protein res subunit2e-1172
NC_016816:1545354:1576845157684515785991755Pantoea ananatis LMG 5342, complete genomeATP-dependent helicase3e-1170.9
NC_015681:1558873:1568001156800115696801680Thermodesulfatator indicus DSM 15286 chromosome, complete genometype III restriction protein res subunit3e-1170.9
NC_020450:875757:8913718913718943582988Lactococcus lactis subsp. lactis IO-1 DNA, complete genometype I restriction enzyme R protein7e-1170.1
NC_011886:1176238:1194985119498511981403156Arthrobacter chlorophenolicus A6, complete genometype III restriction protein res subunit1e-1069.3
NC_020164:89214:1035451035451063402796Staphylococcus warneri SG1, complete genometype I site-specific restriction-modification system restriction subunit2e-1068.9
NC_012914:336750:3498003498003529613162Paenibacillus sp. JDR-2, complete genometype III restriction protein res subunit2e-1068.9
NC_013173:953633:9902449902449933723129Desulfomicrobium baculatum DSM 4028, complete genometype III restriction protein res subunit1e-1068.9
NC_014033:1152994:1166084116608411675021419Prevotella ruminicola 23 chromosome, complete genometype III restriction-modification system subunit Res2e-1068.6
NC_016001:1893685:1910408191040819119461539Flavobacterium branchiophilum, complete genomeputative DNA or RNA helicase4e-1067.4
NC_016912:2433500:2434681243468124360001320Staphylococcus aureus subsp. aureus VC40 chromosome, completeputative truncated helicase5e-1067
NC_015152:2026049:2036181203618120410794899Spirochaeta sp. Buddy chromosome, complete genometype III restriction protein res subunit5e-1067
NC_002745:2553138:2553138255313825544691332Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein9e-1066.2
NC_008009:4421992:4435635443563544387243090Acidobacteria bacterium Ellin345, complete genometype I site-specific deoxyribonuclease, HsdR family4e-0964.3
NC_009801:2898426:2915437291543729186763240Escherichia coli E24377A, complete genometype I site-specific deoxyribonuclease, HsdR family1e-0862.8
NC_020302:1241504:1258261125826112611792919Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein1e-0862.8
NC_015164:4053765:4053765405376540561372373Bacteroides salanitronis DSM 18170 chromosome, complete genometype III restriction protein res subunit1e-0862.8
NC_010581:2999002:3042685304268530457683084Beijerinckia indica subsp. indica ATCC 9039, complete genometype I site-specific deoxyribonuclease, HsdR family1e-0862.4
NC_015564:2870631:2888119288811928897171599Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomeType III restriction enzyme, res subunit2e-0862
NC_012673:2535427:2545081254508125464691389Exiguobacterium sp. AT1b, complete genometype III restriction protein res subunit2e-0862
NC_016803:2431672:2444040244404024472193180Desulfovibrio desulfuricans ND132 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease3e-0861.2
NC_008601:753221:7532217532217563313111Francisella tularensis subsp. novicida U112, complete genometype I restriction-modification system, subunit R (restriction)5e-0860.5
NC_006672:47610:6310163101663973297Gluconobacter oxydans 621H plasmid pGOX1, complete sequencePutative type I restriction enzyme7e-0860.1
NC_009614:3081190:3096739309673930989942256Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein1e-0759.3
NC_014634:28690:4845948459512632805Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequencetype I site-specific deoxyribonuclease, HsdR family1e-0759.3
NC_011830:4187362:4196584419658441997123129Desulfitobacterium hafniense DCB-2, complete genometype I site-specific deoxyribonuclease, HsdR family1e-0758.9
NC_021184:1024305:1026603102660310298363234Desulfotomaculum gibsoniae DSM 7213, complete genometype I site-specific deoxyribonuclease, HsdR family1e-0758.9
NC_009614:4918877:4945504494550449478582355Bacteroides vulgatus ATCC 8482 chromosome, complete genomehelicase1e-0758.9
NC_007413:1405817:1412992141299214159162925Anabaena variabilis ATCC 29413, complete genomeType I site-specific deoxyribonuclease HsdR2e-0758.5
NC_009883:1492425:1518534151853415200871554Rickettsia bellii OSU 85-389, complete genomeType I restriction-modification system methyltransferase subunit2e-0758.2
NC_007940:1485006:1511625151162515131781554Rickettsia bellii RML369-C, complete genomeType I restriction-modification system methyltransferase subunit2e-0758.2
NC_009523:341347:3564713564713595573087Roseiflexus sp. RS-1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease3e-0757.8
NC_006322:741516:7528027528027559603159Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-0757.8
NC_006270:741731:7530187530187561763159Bacillus licheniformis ATCC 14580, complete genomeHsdRI3e-0757.8
NC_012968:239476:2425242425242457453222Methylotenera mobilis JLW8, complete genometype I site-specific deoxyribonuclease, HsdR family5e-0757.4
NC_004757:2657490:267270026727002672855156Nitrosomonas europaea ATCC 19718, complete genome4e-0757.4
NC_005090:1082213:1086874108687410896932820Wolinella succinogenes DSM 1740, complete genomeHSDR PROTEIN PROBABLE TYPE I RESTRICTION ENZYME RESTRICTIONCHAIN4e-0757.4
NC_015576:612164:6435846435846475823999Mycobacterium sp. JDM601 chromosome, complete genometype III restriction enzyme res subunit7e-0756.6
NC_013037:6281164:6318483631848363214072925Dyadobacter fermentans DSM 18053, complete genometype I site-specific deoxyribonuclease, HsdR family9e-0756.2
NC_018876:2151226:2157605215760521608053201Methanolobus psychrophilus R15 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-0655.8
NC_014970:530748:5415305415305444782949Mycoplasma haemofelis str. Langford 1, complete genometype I restriction-modification system endonuclease, R subunit1e-0655.8
NC_012912:1053618:1077362107736210803342973Dickeya zeae Ech1591, complete genometype I site-specific deoxyribonuclease, HsdR family1e-0655.5
NC_013093:626473:6558266558266574031578Actinosynnema mirum DSM 43827, complete genometype III restriction protein res subunit1e-0655.5
NC_014650:1893758:1912565191256519156273063Geobacillus sp. Y4.1MC1 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-0655.5
NC_010995:4338860:4344576434457643477883213Cellvibrio japonicus Ueda107, complete genomeHsdR2e-0655.1
NC_015696:285456:2978402978403009893150Francisella sp. TX077308 chromosome, complete genometype I restriction-modification system, R subunit2e-0655.1
NC_014217:2760898:2767311276731127705263216Starkeya novella DSM 506 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-0654.7
NC_014328:303063:3461993461993501553957Clostridium ljungdahlii ATCC 49587 chromosome, complete genometype I restriction enzyme, endonuclease subunit3e-0654.7
NC_018607:1505908:1515795151579515182542460Brachyspira pilosicoli B2904 chromosome, complete genometype-I restriction endonuclease R subunit HsdR3e-0654.7
NC_015222:3137167:3146394314639431500143621Nitrosomonas sp. AL212 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family3e-0654.3
NC_014371:1218813:1238617123861712414602844Prevotella melaninogenica ATCC 25845 chromosome chromosome II,type I site-specific deoxyribonuclease, HsdR family5e-0653.9
NC_007930:21793:3565835658382852628Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,Type III restriction-modification system restriction subunit5e-0653.9
NC_006510:1400000:1407300140730014103653066Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system specificity protein7e-0653.5
NC_000961:372000:4108894108894122381350Pyrococcus horikoshii OT3, complete genomehypothetical protein7e-0653.5
NC_003902:555699:5610245610245640082985Xanthomonas campestris pv. campestris str. ATCC 33913, completetype I restriction-modification system endonuclease8e-0653.1
NC_007086:557789:5631145631145660982985Xanthomonas campestris pv. campestris str. 8004, complete genometype I restriction-modification system endonuclease8e-0653.1
NC_008786:3915000:3927676392767639306302955Verminephrobacter eiseniae EF01-2, complete genometype I site-specific deoxyribonuclease, HsdR family8e-0653.1
NC_020054:4161049:4175461417546141783312871Fibrella aestuarina BUZ 2 drat genometype I restriction enzyme, R subunit8e-0653.1
NC_013929:3722867:3762747376274737643541608Streptomyces scabiei 87.22 chromosome, complete genomenucleotide modification protein8e-0653.1
NC_014033:1215790:1227726122772612300022277Prevotella ruminicola 23 chromosome, complete genometype III restriction-modification system subunit Res8e-0653.1
NC_016620:781995:7969917969918002093219Bacteriovorax marinus SJ, complete genomeputative type I restriction enzyme9e-0653.1
NC_008571:744500:7519097519097549113003Gramella forsetii KT0803, complete genometype I restriction-modification system restricti on subunit9e-0652.8