Pre_GI Gene

Some Help

Host: NC_006511 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006511:682863 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6828636845061644putative ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
684715685209495ecotin precursorQuickGO ontologyBLASTP
685623686114492ferredoxin-type protein NapFQuickGO ontologyBLASTP
686104686367264putative napAB assembly proteinQuickGO ontologyBLASTP
6863646888502487probable nitrate reductaseQuickGO ontologyBLASTP
688857689552696quinol dehydrogenase periplasmic componentQuickGO ontologyBLASTP
689539690408870quinol dehydrogenase membrane componentQuickGO ontologyBLASTP
690524690973450cytochrome c-type protein NapB precursorQuickGO ontologyBLASTP
690983691585603cytochrome c-type protein NapCQuickGO ontologyBLASTP
691606692223618heme exporter protein A1QuickGO ontologyBLASTP
692223692879657heme exporter protein B1QuickGO ontologyBLASTP
692931693668738heme exporter protein C1QuickGO ontologyBLASTP
693665693877213heme exporter protein D1QuickGO ontologyBLASTP
693874694353480cytochrome c-type biogenesis protein E1QuickGO ontologyBLASTP
6943506962811932cytochrome c-type biogenesis protein F1QuickGO ontologyBLASTP
696278696835558thioldisulfide interchange proteinQuickGO ontologyBLASTP
6968326978751044cytochrome c-type biogenesis protein H1QuickGO ontologyBLASTP
697919698566648nitratenitrite response regulator protein NarPQuickGO ontologyBLASTP
699599699859261hypothetical proteinBLASTP
700052700255204homolog of virulence protein msgAQuickGO ontologyBLASTP
7004407022001761putative sulphataseQuickGO ontologyBLASTP
702232702459228hypothetical proteinBLASTP
7026397036461008nucleoid-associated protein NdpAQuickGO ontologyBLASTP
703674704294621hypothetical proteinBLASTP
70440370468728550S ribosomal protein L25QuickGO ontologyBLASTP
7048127065721761putative helicaseQuickGO ontologyBLASTP
706724707419696ribosomal small subunit pseudouridine synthaseQuickGO ontologyBLASTP
7074477086371191bicyclomycin resistance proteinQuickGO ontologyBLASTP
70863470873299hypothetical proteinBLASTP