Pre_GI Gene

Some Help

Host: NC_012815 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012815:669436 Bifidobacterium animalis subsp. lactis DSM 10140, complete genome

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Bifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314) is an anaerobic Gram-positive lactic acid bacterium commonly found in the guts of healthy humans and has been identified in the infant gut biota, particularly in ileal, fecal, and mucosal samples. Some strains of B. animalis subsp. lactis are able to survive in the GIT, to adhere to human epithelial cells in vitro, to modify fecal flora, to modulate the host immune response, or to prevent microbial gastroenteritis and colitis.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6694366713941959ATP-dependent DNA helicase RecQQuickGO ontologyBLASTP
671696672616921hypothetical proteinBLASTP
672789673346558hypothetical proteinBLASTP
673627673755129hypothetical proteinBLASTP
673887674090204hypothetical proteinBLASTP
674625674945321hypothetical proteinBLASTP
675087675428342hypothetical proteinBLASTP
675452675835384hypothetical proteinBLASTP
676005676406402putative pyrophosphohydrolaseQuickGO ontologyBLASTP
6764596795843126superfamily II DNARNA helicaseQuickGO ontologyBLASTP
680209680565357hypothetical proteinBLASTP
6809986829651968type I restriction-modification system proteinQuickGO ontologyBLASTP
683204683716513putative prophage proteinQuickGO ontologyBLASTP
683734684228495hypothetical proteinBLASTP
684225684704480hypothetical proteinBLASTP
684771685568798hypothetical proteinBLASTP
6856766866891014glycerol dehydrogenaseQuickGO ontologyBLASTP
687070687570501S-ribosylhomocysteinaseQuickGO ontologyBLASTP
687683688207525Histone acetyltransferaseQuickGO ontologyBLASTP
6882836896501368alanine racemaseQuickGO ontologyBLASTP
6897606918412082DNA primaseQuickGO ontologyBLASTP