Pre_GI Gene

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Host: NC_008146 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008146:4019711 Mycobacterium sp. MCS, complete genome

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
401858840197211134peptidase M24QuickGO ontologyBLASTP
401971140209791269peptidase M24QuickGO ontologyBLASTP
402097940221511173amidohydrolase 2QuickGO ontologyBLASTP
402218540234231239cytochrome P450QuickGO ontologyBLASTP
40234254023619195putative ferredoxinQuickGO ontologyBLASTP
40236194024326708transcriptional regulator TetR familyQuickGO ontologyBLASTP
40243234025171849short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
40251714026019849alphabeta hydrolase foldQuickGO ontologyBLASTP
402608340273721290N-6 DNA methylaseQuickGO ontologyBLASTP
40275834027996414hypothetical proteinBLASTP
40279994028856858hypothetical proteinBLASTP
40291844029513330hypothetical proteinBLASTP
40295554029863309hypothetical proteinBLASTP
402986040311191260Restriction endonuclease S subunits-like proteinQuickGO ontologyBLASTP
40311164031430315type I site-specific deoxyribonucleaseQuickGO ontologyBLASTP
403142740338382412type III restriction enzyme res subunitQuickGO ontologyBLASTP
40340424034623582NADPH-dependent FMN reductaseQuickGO ontologyBLASTP
40346354035624990hypothetical proteinBLASTP
40356264036450825short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
403645940377691311luciferase-like proteinQuickGO ontologyBLASTP
403776640395471782fumarate reductasesuccinate dehydrogenase flavoprotein-like proteinQuickGO ontologyBLASTP
40395444040392849Extradiol ring-cleavage dioxygenase class III enzyme subunit BQuickGO ontologyBLASTP
404040940421301722monooxygenase FAD-binding proteinQuickGO ontologyBLASTP
40421304042993864alphabeta hydrolase foldQuickGO ontologyBLASTP