Pre_GI Gene

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Host: NC_012582 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012582:882931 Vibrio cholerae O395 chromosome chromosome I, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8829318845471617hypothetical proteinBLASTP
884615885298684hypothetical proteinBLASTP
885270885422153hypothetical proteinBLASTP
8854318872001770hypothetical proteinBLASTP
887392887907516hypothetical proteinBLASTP
888241888945705hypothetical proteinBLASTP
8890158919542940helicase-related proteinQuickGO ontologyBLASTP
891955892533579tellurite resistance protein-related proteinQuickGO ontologyBLASTP
892961893440480putative transcriptional regulatorQuickGO ontologyBLASTP
8934258947951371hypothetical proteinBLASTP
894906895088183hypothetical proteinBLASTP
895384896367984ISVch1 transposase IS481 groupQuickGO ontologyBLASTP
8974158990401626aldehyde dehydrogenaseQuickGO ontologyBLASTP
8991169021573042ToxR-activated gene A proteinQuickGO ontologyBLASTP
906867907805939hypothetical proteinBLASTP
907915908409495tagD proteinQuickGO ontologyBLASTP
9087019105631863toxin co-regulated pilus biosynthesis protein IQuickGO ontologyBLASTP
911000911665666toxin co-regulated pilus biosynthesis protein PQuickGO ontologyBLASTP
911650912060411toxin co-regulated pilus biosynthesis protein HQuickGO ontologyBLASTP