Pre_GI Gene

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Host: NC_011835 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011835:1395716 Bifidobacterium animalis subsp. lactis AD011 chromosome, complete

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Isolated from the fecal sample of a healthy, breast-fed infant. Normal gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
139571613976741959ATP-dependent DNA helicase RecQQuickGO ontologyBLASTP
13979761398896921hypothetical proteinBLASTP
13990691399626558GNAT family acetyltransferaseQuickGO ontologyBLASTP
13999071400035129hypothetical proteinBLASTP
14003951400622228hypothetical proteinBLASTP
14006441400787144hypothetical proteinBLASTP
14007731401225453hypothetical proteinBLASTP
14013671401708342hypothetical proteinBLASTP
14017321402115384hypothetical proteinBLASTP
14022851402686402NTP pyrophosphohydrolaseQuickGO ontologyBLASTP
140280214058643063DNA or RNA helicase of superfamily IIQuickGO ontologyBLASTP
14060301406845816filamentation induced by cAMP protein ficQuickGO ontologyBLASTP
140729614092451950type I restriction-modification system proteinQuickGO ontologyBLASTP
14094841409996513hypothetical proteinBLASTP
14102121410508297death-on-curing proteinQuickGO ontologyBLASTP
14105051410984480acetyltransferaseQuickGO ontologyBLASTP
14110511411848798steroid reductaseQuickGO ontologyBLASTP
141195614131131158oxidoreductaseQuickGO ontologyBLASTP
14133501413850501S-ribosylhomocysteinaseQuickGO ontologyBLASTP
14139631414487525acetyltransferaseQuickGO ontologyBLASTP
141457214159301359alanine racemaseQuickGO ontologyBLASTP
141604014181212082DNA primaseQuickGO ontologyBLASTP