Pre_GI Gene

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Host: NC_009512 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009512:5166459 Pseudomonas putida F1, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
516645951688312373EcoEI R C-terminal domain proteinQuickGO ontologyBLASTP
516963251728803249Non-specific serinethreonine protein kinaseQuickGO ontologyBLASTP
517288051745051626hypothetical proteinBLASTP
51745025175245744hypothetical proteinBLASTP
517525951774512193hypothetical proteinBLASTP
517804951793591311McrBC 5-methylcytosine restriction system component-like proteinQuickGO ontologyBLASTP
517935651819442589ATPase associated with various cellular activities AAA_5QuickGO ontologyBLASTP
51827685183448681hypothetical proteinBLASTP
51837525184018267hypothetical proteinBLASTP
51841325185007876transcriptional regulator-like proteinQuickGO ontologyBLASTP
518535751877502394TonB-dependent siderophore receptorQuickGO ontologyBLASTP
51882395188991753hypothetical proteinBLASTP
51894705190093624hypothetical proteinBLASTP
519028451916751392amino acid permease-associated regionQuickGO ontologyBLASTP
519209351934361344d-galactonate transporterQuickGO ontologyBLASTP