Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:309133 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3091333109651833ATPase associated with various cellular activities AAA_5QuickGO ontologyBLASTP
3109833124881506Restriction endonuclease type II LlaJIQuickGO ontologyBLASTP
312701313105405NUDIX hydrolaseQuickGO ontologyBLASTP
3131023159812880Protein of unknown function DUF3427QuickGO ontologyBLASTP
316263317105843primosome DnaD subunitQuickGO ontologyBLASTP
3172823182861005transcriptional regulator MerR familyQuickGO ontologyBLASTP
318318318926609hypothetical proteinBLASTP
319127319321195hypothetical protein
319359319586228Protein of unknown function DUF2922QuickGO ontology
3197633214301668hypothetical proteinBLASTP
3217793240432265transcriptional regulator AraC familyQuickGO ontologyBLASTP
3242063255641359extracellular solute-binding protein family 1QuickGO ontologyBLASTP
325615326514900ABC-type transporter integral membrane subunitQuickGO ontologyBLASTP
326511327350840ABC-type transporter integral membrane subunitQuickGO ontologyBLASTP
3273643292441881glycoside hydrolase family 2 TIM barrelQuickGO ontologyBLASTP
329228330196969Beta-galactosidaseQuickGO ontologyBLASTP