Pre_GI: BLASTN Hits

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Query: NC_016861:22256 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 22256, End: 41623, Length: 19368

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This strain was isolated in Japan in 2000. It is of definitive phage type 12 (DT12) and resistant against mulitple antimicrobials including fluoroquinolones.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003277:22257222574180619550Salmonella typhimurium LT2 plasmid pSLT, complete sequence029110BLASTN svgBLASTP svg
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome01631BLASTN svgBLASTP svg
NC_009651:19909199094332823420Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5,01631BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,01628BLASTN svgBLASTP svg
NC_011751:49925004992500501338720888Escherichia coli UMN026 chromosome, complete genome01628BLASTN svgBLASTP svg
NC_006856:26438*264384625619819Salmonella enterica subsp. enterica serovar Choleraesuis str01626BLASTN svgBLASTP svg
NC_010545:1781393*1781393180797326581Corynebacterium urealyticum DSM 7109, complete genome01626BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete01626BLASTN svgBLASTP svg
NC_003384:15715815715818443827281Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid01626BLASTN svgBLASTP svg
NC_010611:24083924083927225731419Acinetobacter baumannii ACICU, complete genome01624BLASTN svgBLASTP svg
NC_011083:15243371524337154332418988Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,01618BLASTN svgBLASTP svg
NC_009649:16907169074359926693Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,01618BLASTN svgBLASTP svg
NC_013421:2613137*2613137263682223686Pectobacterium wasabiae WPP163, complete genome1e-159571BLASTN svgBLASTP svg
NC_013592:80428880428883459430307Dickeya dadantii Ech586, complete genome8e-139502BLASTN svgBLASTP svg
NC_013421:32794993279499331516735669Pectobacterium wasabiae WPP163, complete genome4e-134486BLASTN svgBLASTP svg
NC_009720:50790485079048510209923052Xanthobacter autotrophicus Py2, complete genome1e-118434BLASTN svgBLASTP svg
NC_011749:34056*340565613322078Escherichia coli UMN026 plasmid p1ESCUM, complete sequence9e-77295BLASTN svgBLASTP svg
NC_012880:3529017*3529017356582436808Dickeya dadantii Ech703, complete genome2e-62248BLASTN svgBLASTP svg
NC_012917:32411963241196329451553320Pectobacterium carotovorum subsp. carotovorum PC1, complete genome4e-60240BLASTN svgBLASTP svg
NC_010102:4745949*4745949476837922431Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-46194BLASTN svgBLASTP svg
NC_012214:74530274530276695921658Erwinia pyrifoliae Ep1/96, complete genome3e-33151BLASTN svgBLASTP svg
NC_012214:53700053700055834721348Erwinia pyrifoliae Ep1/96, complete genome3e-33151BLASTN svgBLASTP svg
NC_007384:17378851737885176063922755Shigella sonnei Ss046, complete genome5e-32147BLASTN svgBLASTP svg
NC_007385:15751615751617664619131Shigella sonnei Ss046 plasmid pSS_046, complete sequence2e-31145BLASTN svgBLASTP svg
NC_007384:307013*30701333111524103Shigella sonnei Ss046, complete genome2e-31145BLASTN svgBLASTP svg
NC_007384:20074672007467203964532179Shigella sonnei Ss046, complete genome2e-31145BLASTN svgBLASTP svg
NC_002695:38522333852233387887626644Escherichia coli O157:H7 str. Sakai, complete genome2e-31145BLASTN svgBLASTP svg
NC_002655:39195453919545394618926645Escherichia coli O157:H7 EDL933, complete genome2e-31145BLASTN svgBLASTP svg
NC_010067:2304313*2304313233059926287Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete8e-31143BLASTN svgBLASTP svg
NC_012779:2424967*2424967244959924633Edwardsiella ictaluri 93-146, complete genome8e-31143BLASTN svgBLASTP svg
NC_011080:27224922722492274217119680Salmonella enterica subsp. enterica serovar Newport str. SL254,5e-29137BLASTN svgBLASTP svg
NC_003197:27207262720726274079420069Salmonella typhimurium LT2, complete genome5e-29137BLASTN svgBLASTP svg
NC_010660:175200*17520020478429585Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence2e-28135BLASTN svgBLASTP svg
CU928159:30700*307004909918400Escherichia coli str. 55989 plasmid 55989p, complete genome7e-28133BLASTN svgBLASTP svg
NC_012880:10914861091486111695125466Dickeya dadantii Ech703, complete genome7e-28133BLASTN svgBLASTP svg
AP010958:5090696*5090696512565934964Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-26129BLASTN svgBLASTP svg
AP010958:36273553627355365976432410Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-26129BLASTN svgBLASTP svg
CU928145:3360967*3360967340151440548Escherichia coli 55989 chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_002655:22647732264773228824723475Escherichia coli O157:H7 EDL933, complete genome2e-25125BLASTN svgBLASTP svg
NC_002695:17946351794635181624421610Escherichia coli O157:H7 str. Sakai, complete genome2e-25125BLASTN svgBLASTP svg
NC_011748:3360967*3360967340151440548Escherichia coli 55989, complete genome2e-25125BLASTN svgBLASTP svg
NC_012779:1449500*1449500150683157332Edwardsiella ictaluri 93-146, complete genome7e-25123BLASTN svgBLASTP svg
NC_008253:3941938*3941938399883856901Escherichia coli 536, complete genome7e-25123BLASTN svgBLASTP svg
NC_008463:1188951*1188951120759918649Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-24121BLASTN svgBLASTP svg
NC_002516:4321000*4321000434209921100Pseudomonas aeruginosa PAO1, complete genome3e-24121BLASTN svgBLASTP svg
NC_012214:13555001355500137677021271Erwinia pyrifoliae Ep1/96, complete genome4e-23117BLASTN svgBLASTP svg
NC_011149:3863913*3863913388509921187Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-20109BLASTN svgBLASTP svg
NC_009788:16360163603711520756Escherichia coli E24377A plasmid pETEC_73, complete sequence4e-1797.6BLASTN svgBLASTP svg
NC_011751:23270142327014235440227389Escherichia coli UMN026 chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_014228:33538963353896338544531550Xenorhabdus nematophila ATCC 19061, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_012779:28560512856051288659930549Edwardsiella ictaluri 93-146, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_010067:892729*89272992523832510Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete6e-1383.8BLASTN svgBLASTP svg
NC_003143:16300001630000167609946100Yersinia pestis CO92, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004088:29663312966331300002833698Yersinia pestis KIM, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_005810:14677721467772150509937328Yersinia pestis biovar Microtus str. 91001, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008149:28023922802392285367651285Yersinia pestis Nepal516, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008150:84472784472789009945373Yersinia pestis Antiqua, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015572:49164304916430495009933670Methylomonas methanica MC09 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013508:18628961862896188607023175Edwardsiella tarda EIB202, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002678:3210751*3210751323209921349Mesorhizobium loti MAFF303099, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_003134:64672646728918124510Yersinia pestis CO92 plasmid pMT1, complete sequence2e-0971.9BLASTN svgBLASTP svg
NC_004838:510135101310003049018Yersinia pestis KIM plasmid pMT-1, complete sequence2e-0971.9BLASTN svgBLASTP svg
NC_005773:16757931675793169861222820Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_005815:611486114811099949852Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, complete2e-0971.9BLASTN svgBLASTP svg
NC_008118:567775677710299946223Yersinia pestis Nepal516 plasmid pMT, complete sequence2e-0971.9BLASTN svgBLASTP svg
NC_010158:928199281911499922181Yersinia pestis Angola plasmid pMT-pPCP, complete sequence2e-0971.9BLASTN svgBLASTP svg
NC_013956:31814213181421320344322023Pantoea ananatis LMG 20103 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_005126:5188976*5188976521454825573Photorhabdus luminescens subsp. laumondii TTO1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012779:33168773316877333727020394Edwardsiella ictaluri 93-146, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014170:57954579548259924646Xenorhabdus nematophila ATCC 19061 plasmid XNC1_p, complete6e-0763.9BLASTN svgBLASTP svg
NC_015942:10475761047576107197424399Acidithiobacillus ferrivorans SS3 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015556:2265940*2265940233644770508Pseudomonas fulva 12-X chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_014774:1210004*1210004126949959496Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete9e-0660BLASTN svgBLASTP svg
NC_012880:3982383*3982383401264230260Dickeya dadantii Ech703, complete genome9e-0660BLASTN svgBLASTP svg