Pre_GI: BLASTP Hits

Some Help

Query: NC_015224:3587500:3587550 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 3587550, End: 3587933, Length: 384

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:1090000:112371111237111124094384Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,autonomous glycyl radical cofactor GrcA3e-70263
NC_020064:3609844:360984436098443610227384Serratia marcescens FGI94, complete genomeacid-induced glycyl radical enzyme7e-65245
NC_016818:3736213:373763137376313738014384Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeacid-induced glycyl radical enzyme8e-65245
NC_012912:1200000:122155712215571221940384Dickeya zeae Ech1591, complete genomeformate C-acetyltransferase glycine radical3e-60229
NC_010102:283364:305348305348305731384Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-60229
NC_017027:1329708:133065213306521331035384Pasteurella multocida subsp. multocida str. HN06 chromosome,autonomous glycyl radical cofactor GrcA2e-57220
NC_008309:502983:520757520757521140384Haemophilus somnus 129PT, complete genomepossible acid-induced glycyl radical protein8e-57218
NC_010519:2033980:203491120349112035294384Haemophilus somnus 2336 chromosome, complete genomeautonomous glycyl radical cofactor GrcA8e-57218
NC_010278:398521:407319407319407705387Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,autonomous glycyl radical cofactor GrcA1e-54211
NC_009053:393700:402489402489402875387Actinobacillus pleuropneumoniae L20, complete genomeautonomous glycyl radical cofactor1e-54211
NC_010939:405477:430201430201430587387Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeautonomous glycyl radical cofactor1e-54211
NC_004347:3028000:3042162304216230444442283Shewanella oneidensis MR-1, complete genomeformate acetyltransferase2e-24110
NC_011094:1050700:1063602106360210658842283Salmonella enterica subsp. enterica serovar Schwarzengrund strformate acetyltransferase5e-24109
NC_009831:2045811:2046645204664520489272283Shewanella sediminis HAW-EB3, complete genomeFormate C-acetyltransferase5e-24109
NC_009801:995396:1017186101718610194682283Escherichia coli E24377A, complete genomeformate acetyltransferase2e-23107
NC_007712:1601499:1624825162482516271072283Sodalis glossinidius str. 'morsitans', complete genomeformate acetyltransferase 15e-23106
CP002516:613462:6259516259516282452295Escherichia coli KO11, complete genomeformate acetyltransferase6e-23105
NC_011748:3608917:3613700361370036159942295Escherichia coli 55989, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase6e-23105
NC_009800:3307123:3308962330896233112562295Escherichia coli HS, complete genomeformate acetyltransferase6e-23105
AC_000091:3258377:3258780325878032610742295Escherichia coli W3110 DNA, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase6e-23105
CP002185:3475991:3477828347782834801222295Escherichia coli W, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase6e-23105
NC_000913:3256307:3258146325814632604402295Escherichia coli K12, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase6e-23105
NC_017328:3289853:3291692329169232939862295Shigella flexneri 2002017 chromosome, complete genomeKeto-acid formate acetyltransferase6e-23105
NC_004741:3240909:3242748324274832450422295Shigella flexneri 2a str. 2457T, complete genomeprobable formate acetyltransferase 36e-23105
NC_004337:3249791:3251630325163032539242295Shigella flexneri 2a str. 301, complete genomeprobable formate acetyltransferase 36e-23105
NC_009801:3595001:3595001359500135972952295Escherichia coli E24377A, complete genomeformate acetyltransferase6e-23105
NC_007613:2981829:2982232298223229845262295Shigella boydii Sb227, complete genomeprobable formate acetyltransferase 38e-23105
NC_010658:3014371:3024716302471630270102295Shigella boydii CDC 3083-94, complete genomeformate acetyltransferase8e-23105
NC_002695:3994970:3999753399975340020472295Escherichia coli O157:H7 str. Sakai, complete genomeputative formate acetyltransferase 36e-23105
CU928160:3344746:3346585334658533488792295Escherichia coli IAI1 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase6e-23105
NC_010473:3354052:3355891335589133581852295Escherichia coli str. K-12 substr. DH10B, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase6e-23105
NC_011751:3710786:3715570371557037178642295Escherichia coli UMN026 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase6e-23105
NC_010498:3488513:3490352349035234926462295Escherichia coli SMS-3-5, complete genomeformate acetyltransferase6e-23105
NC_010468:613812:6281426281426304362295Escherichia coli ATCC 8739, complete genomeformate acetyltransferase6e-23105
NC_008258:3224721:3226560322656032288542295Shigella flexneri 5 str. 8401, complete genomeprobable formate acetyltransferase 36e-23105
NC_016902:613462:6259516259516282452295Escherichia coli KO11FL chromosome, complete genomeformate acetyltransferase6e-23105
NC_013941:3884725:3889508388950838918022295Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeKeto-acid formate acetyltransferase6e-23105
NC_012967:3191319:3193158319315831954522295Escherichia coli B str. REL606 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase6e-23105
NC_012947:630757:6450876450876473812295Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeformate acetyltransferase6e-23105
NC_012759:3143455:3145294314529431475882295Escherichia coli BW2952 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase6e-23105
NC_011741:3344746:3346585334658533488792295Escherichia coli IAI1 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase6e-23105
NC_011415:3523364:3528147352814735304412295Escherichia coli SE11 chromosome, complete genomeputative formate acetyltransferase 36e-23105
CU928145:3608917:3613700361370036159942295Escherichia coli 55989 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase6e-23105
NC_014618:586240:6080576080576103512295Enterobacter cloacae SCF1 chromosome, complete genomeformate acetyltransferase2e-22104
NC_011750:3768692:3773475377347537757692295Escherichia coli IAI39 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase3e-22103
NC_019970:35985:5853358533607612229Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeformate acetyltransferase 11e-1891.7
NC_015977:442493:4755774755774778052229Roseburia hominis A2-183 chromosome, complete genomeformate acetyltransferase1e-1891.3
NC_015555:49842:7171371713739412229Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeformate acetyltransferase2e-1891.3
NC_010001:3421710:344307534430753443323249Clostridium phytofermentans ISDg, complete genomeformate C-acetyltransferase glycine radical2e-1890.9
NC_017343:224777:2247772247772270262250Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeformate acetyltransferase3e-1890.5
NC_014376:317312:336997336997337242246Clostridium saccharolyticum WM1 chromosome, complete genomeformate C-acetyltransferase glycine radical6e-1889.4
NC_013093:2633000:2675503267550326777612259Actinosynnema mirum DSM 43827, complete genomeformate acetyltransferase8e-1889
NC_015709:1769806:1795826179582617981412316Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeformate acetyltransferase1e-1788.6
NC_014933:2240000:2242892224289222451292238Bacteroides helcogenes P 36-108 chromosome, complete genomeformate acetyltransferase3e-1787
NC_008618:1206157:1228494122849412308692376Bifidobacterium adolescentis ATCC 15703, complete genomeformate acetyltransferase5e-1786.3
NC_013714:1521404:1544052154405215464272376Bifidobacterium dentium Bd1, complete genomepfl Formate acetyltransferase5e-1786.3
NC_015275:1223088:1243865124386512460932229Clostridium lentocellum DSM 5427 chromosome, complete genomeformate acetyltransferase6e-1785.9
NC_018750:3315309:3327502332750233297812280Streptomyces venezuelae ATCC 10712, complete genomePyruvate formate-lyase1e-1685.1
NC_016605:233087:2343352343352365932259Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeformate acetyltransferase9e-1682
NC_014614:2500301:2523531252353125257742244Clostridium sticklandii, complete genomepyruvate formate lyase I1e-1478.2
NC_017068:1216548:1233793123379312360242232Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative pyruvate formate-lyase5e-1476.3
NC_013410:1285857:1287270128727012895252256Fibrobacter succinogenes subsp. succinogenes S85 chromosome,formate acetyltransferase2e-1167.8
AP010958:922937:9447969447969472282433Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted pyruvate formate lyase3e-1063.5
NC_013353:922937:9447969447969472282433Escherichia coli O103:H2 str. 12009, complete genomepyruvate formate lyase3e-1063.5
NC_013364:928486:9490679490679514992433Escherichia coli O111:H- str. 11128, complete genomeputative pyruvate formate lyase3e-1063.5
NC_010001:1488000:1489322148932214919252604Clostridium phytofermentans ISDg, complete genomepyruvate formate-lyase2e-0961.6
NC_002737:1670164:1705477170547717078942418Streptococcus pyogenes M1 GAS, complete genomeputative pyruvate formate-lyase 22e-0961.2
NC_021182:966839:9668399668399693252487Clostridium pasteurianum BC1, complete genomepyruvate-formate lyase2e-0961.2
NC_008023:1707021:1728268172826817306852418Streptococcus pyogenes MGAS2096, complete genomeFormate acetyltransferase2e-0960.8
NC_015424:2917817:2938443293844329408782436Aeromonas veronii B565 chromosome, complete genomeformate acetyltransferase 35e-0959.7
NC_014624:2297000:2309569230956923119532385Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein7e-0959.3
NC_016938:193000:2130022130022154342433Melissococcus plutonius DAT561 chromosome 1, complete genomepyruvate formate-lyase1e-0858.5
NC_011134:1854868:1873022187302218754392418Streptococcus equi subsp. zooepidemicus str. MGCS10565, completepyruvate formate-lyase2e-0858.2
NC_015573:2463123:2501489250148925039782490Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeFormate C-acetyltransferase2e-0857.8
NC_014363:1344768:1367739136773913701532415Olsenella uli DSM 7084 chromosome, complete genomepyruvate formate-lyase5e-0856.6
NC_013517:2055071:2057425205742520597222298Sebaldella termitidis ATCC 33386, complete genomepyruvate formate-lyase6e-0856.2
NC_009615:919495:9222889222889247202433Parabacteroides distasonis ATCC 8503 chromosome, complete genomeformate C-acetyltransferase2e-0754.3
NC_008750:450233:4655524655524680952544Shewanella sp. W3-18-1, complete genomepyruvate formate-lyase3e-0753.9
NC_009438:212476:2279922279922305352544Shewanella putrefaciens CN-32 chromosome, complete genomepyruvate formate-lyase3e-0753.9
NC_009943:1043210:1060198106019810625462349Candidatus Desulfococcus oleovorans Hxd3, complete genomeFormate C-acetyltransferase4e-0753.5
NC_008751:607209:6257176257176282032487Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeFormate C-acetyltransferase5e-0753.1
NC_014328:2872721:2875133287513328774872355Clostridium ljungdahlii ATCC 49587 chromosome, complete genomepyruvate formate-lyase1e-0652
NC_006138:656000:6722656722656746162352Desulfotalea psychrophila LSv54, complete genomeformate C-acetyltransferase1e-0652
NC_014033:1808782:1831615183161518336091995Prevotella ruminicola 23 chromosome, complete genomepyruvate formate lyase family protein1e-0651.6
NC_014364:4488875:4505347450534745076892343Spirochaeta smaragdinae DSM 11293 chromosome, complete genomepyruvate formate-lyase2e-0651.2
NC_004431:4270305:4315437431543743179892553Escherichia coli CFT073, complete genomehypothetical protein3e-0650.8
NC_016048:3856665:3869661386966138720362376Oscillibacter valericigenes Sjm18-20, complete genomepyruvate formate-lyase family protein3e-0650.4
NC_010001:1745089:1755519175551917580652547Clostridium phytofermentans ISDg, complete genomeFormate C-acetyltransferase4e-0650.1