Pre_GI Gene

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Host: NC_013093 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013093:2633000 Actinosynnema mirum DSM 43827, complete genome

Host Lineage: Actinosynnema mirum; Actinosynnema; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Isolation: Blade of grass from Raritan River NJ; Country: USA; Temp: Mesophile; Temp: 10-30C; Habitat: Soil. This bacterium produces the antibiotic nocardicin A. Soil dwelling, nonmotile aerobe it has fine hyphae which form aerial and substrate mycelia. Motile spores are borne on synnemata, compact groups of erect hyphae. It produces nocardicin antibiotics and is able to inhibit growth of several Gram-positive bacteria as well as some filamentous fungi and yeasts.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
263317026343181149response regulator receiver proteinQuickGO ontologyBLASTP
26343672635044678transcriptional regulator GntR familyQuickGO ontologyBLASTP
26354672636114648hypothetical protein
26362062636730525CHRD domain containing proteinQuickGO ontology
26368292637188360hypothetical proteinBLASTP
26372742637786513transcriptional regulator MarR familyQuickGO ontologyBLASTP
26379712638822852transcriptional regulator XRE familyQuickGO ontologyBLASTP
26389422639841900short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
26399102640227318hypothetical protein
264046526424772013PASPAC sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
26429712643297327branched-chain amino acid transportQuickGO ontology
26432902643949660AzlC family proteinQuickGO ontologyBLASTP
26441022644560459transcriptional regulator AsnC familyQuickGO ontologyBLASTP
264457226458971326major facilitator superfamily MFS_1QuickGO ontologyBLASTP
26460472646577531transcriptional regulator TetR familyQuickGO ontologyBLASTP
26467012647252552hypothetical proteinBLASTP
26474232647839417RbsD or FucU transportQuickGO ontologyBLASTP
26481842648804621hypothetical proteinBLASTP
26488762649811936helix-turn-helix domain proteinQuickGO ontologyBLASTP
26498982650608711short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
26506792651008330hypothetical proteinBLASTP
265115826530981941heat shock protein Hsp90QuickGO ontologyBLASTP
26537472654220474hypothetical proteinBLASTP
26544092655014606hypothetical proteinBLASTP
26552662656051786short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
26561072656499393hypothetical protein
265719326582181026Luciferase-like monooxygenaseQuickGO ontologyBLASTP
26582822658647366RNA-binding S4 domain proteinQuickGO ontologyBLASTP
26588062659078273hypothetical proteinBLASTP
26593632660220858Luciferase-like monooxygenaseQuickGO ontologyBLASTP
26603612661191831Siderophore-interacting proteinQuickGO ontologyBLASTP
26613652661991627hypothetical protein
266198126631201140transcriptional regulator LacI familyQuickGO ontologyBLASTP
266325026645241275extracellular solute-binding protein family 1QuickGO ontologyBLASTP
26645242665408885binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
26654082666238831binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
26662692666958690hypothetical proteinBLASTP
26669552667653699ABC transporter relatedQuickGO ontologyBLASTP
26676882668353666two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
266834326693741032histidine kinaseQuickGO ontologyBLASTP
26694042669805402hypothetical proteinBLASTP
26699192670635717hypothetical protein
26708452671405561hypothetical protein
26717872672764978nitroreductaseQuickGO ontologyBLASTP
26729422673529588hypothetical protein
26736232674456834UspA domain proteinQuickGO ontologyBLASTP
26745782675423846pyruvate formate-lyase activating enzymeQuickGO ontologyBLASTP
267550326777612259formate acetyltransferaseQuickGO ontologyBLASTP
267807226800691998hypothetical protein
26802362680628393hypothetical protein
2680859269098010122conserved repeat domain proteinQuickGO ontologyBLASTP