Pre_GI Gene

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Host: NC_008309 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008309:502983 Haemophilus somnus 129PT, complete genome

Host Lineage: Histophilus somni; Histophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: This strain is an asymptomatic carrier strain that was serum-resistant. Causes disease in cattle. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is a major cause of disease in feedlot cattle. It causes constriction of blood vessels supplying major organs, restricting blood supply which leads to reduced oxygen delivery, and leads to tissue damage and death. The diseases that result are pneumonia, arthritis, myocarditis (inflammation of heart muscle), and reproductive problems resulting in the loss of millions of dollars in animals each year.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5029835043501368coproporphyrinogen oxidase oxygen-independent coproporphyrinogen-III oxidaseQuickGO ontologyBLASTP
504384504866483SsrA-binding protein tmRNA-binding proteinQuickGO ontologyBLASTP
50499450646914763-octaprenyl-4-hydroxybenzoate carboxy-lyase polyprenyl p-hydroxybenzoate decarboxylaseQuickGO ontologyBLASTP
5065095076991191cystathionine beta-lyaseQuickGO ontologyBLASTP
507852508454603AhpCTSA family proteinQuickGO ontologyBLASTP
50863950890827030S ribosomal protein S15QuickGO ontologyBLASTP
5091635177188556possible cell-surface large adhesinQuickGO ontologyBLASTP
5185925206582067glycyl-tRNA synthetase beta subunit glycine--tRNA ligase beta subunitQuickGO ontologyBLASTP
520757521140384possible acid-induced glycyl radical proteinQuickGO ontologyBLASTP
521400522071672uracil-DNA glycosylase UDGQuickGO ontologyBLASTP
522087522863777hypothetical proteinBLASTP
522860523414555hypothetical protein
523429524325897cation efflux proteinQuickGO ontologyBLASTP
5244385254039666-phosphofructokinaseQuickGO ontologyBLASTP
5256745267201047transposaseQuickGO ontologyBLASTP
5271195283811263HflK proteinQuickGO ontologyBLASTP
528381529268888HflC proteinQuickGO ontologyBLASTP