Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:1223088 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
122200012230911092phosphotransferase system EIICQuickGO ontologyBLASTP
12230881223657570sporulation protein YyaCQuickGO ontologyBLASTP
122395712252521296Peptidoglycan-binding lysin domain proteinQuickGO ontologyBLASTP
122535212268121461Glycogen synthaseQuickGO ontologyBLASTP
122698612281701185hypothetical proteinBLASTP
12281731228862690Colicin V production proteinQuickGO ontology
1231043123111573tRNA-AlaQuickGO ontologyBLASTP
1234474123454572tRNA-GluQuickGO ontology
12349791235152174protein of unknown function DUF951QuickGO ontologyBLASTP
12353071235597291ribosomal protein S6QuickGO ontologyBLASTP
12356251236074450single-strand binding proteinQuickGO ontologyBLASTP
12361071236340234ribosomal protein S18QuickGO ontologyBLASTP
12365601237543984Protein of unknown function DUF2232 membraneQuickGO ontology
123756312395722010putative phosphoesteraseQuickGO ontologyBLASTP
12395691240015447ribosomal protein L9QuickGO ontologyBLASTP
124006312413911329replicative DNA helicaseQuickGO ontologyBLASTP
12416601242157498GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
12422551242911657regulatory protein MerRQuickGO ontologyBLASTP
12430211243746726pyruvate formate-lyase activating enzymeQuickGO ontologyBLASTP
124386512460932229formate acetyltransferaseQuickGO ontologyBLASTP
12465121247195684Negative regulator of genetic competenceQuickGO ontologyBLASTP