Pre_GI Gene

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Host: NC_010102 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010102:283364 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2833642850821719hypothetical proteinBLASTP
285193285900708hypothetical proteinBLASTP
285897286301405hypothetical proteinBLASTP
286420287235816hypothetical proteinBLASTP
287274287912639hypothetical proteinBLASTP
2879202889511032hypothetical proteinBLASTP
289141289707567hypothetical proteinBLASTP
289778289900123hypothetical protein
2950782951931165S ribosomal RNAQuickGO ontologyBLASTP
295402295857456hypothetical proteinBLASTP
2959612972621302hypothetical proteinBLASTP
297259297576318hypothetical proteinBLASTP
2976272989851359hypothetical proteinBLASTP
2990973017572661hypothetical proteinBLASTP
301811302491681hypothetical proteinBLASTP
302564302983420hypothetical proteinBLASTP
3031873042241038hypothetical proteinBLASTP
304340305029690hypothetical proteinBLASTP
305348305731384hypothetical proteinBLASTP
305793306245453hypothetical proteinBLASTP