Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:1488000 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14883401488792453hypothetical protein
148932214919252604pyruvate formate-lyaseQuickGO ontologyBLASTP
14919611492752792glycyl-radical enzyme activating protein familyQuickGO ontologyBLASTP
14929511493310360microcompartments proteinQuickGO ontologyBLASTP
14936421494436795class II aldolaseadducin family proteinQuickGO ontologyBLASTP
149448414958721389Aldehyde Dehydrogenase_QuickGO ontologyBLASTP
149589514970941200Alcohol dehydrogenase zinc-binding domain proteinQuickGO ontologyBLASTP
14971101497424315microcompartments proteinQuickGO ontologyBLASTP
14975141497816303microcompartments proteinQuickGO ontologyBLASTP
14978431498337495microcompartments proteinQuickGO ontologyBLASTP
14985181499159642Propanediol utilization proteinQuickGO ontologyBLASTP
14992001499460261Ethanolamine utilization protein EutNcarboxysome structural protein CcmlQuickGO ontologyBLASTP
149946415007921329Respiratory-chain NADH dehydrogenase domain 51 kDa subunitQuickGO ontologyBLASTP
15008771501425549microcompartments proteinQuickGO ontologyBLASTP
15018981502671774transcriptional regulator DeoR familyQuickGO ontologyBLASTP
150281715055102694peptidase S41QuickGO ontologyBLASTP
150614115072381098peptidase domain proteinQuickGO ontology
15073601507611252hypothetical protein
15077221508087366iron metal dependent repressor DtxR familyQuickGO ontologyBLASTP
15083461508567222FeoA family proteinQuickGO ontologyBLASTP
15086331508854222FeoA family proteinQuickGO ontologyBLASTP
150904715111912145ferrous iron transport protein BQuickGO ontologyBLASTP