Pre_GI: BLASTP Hits

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Query: NC_014328:303063:355534 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 355534, End: 356307, Length: 774

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014393:4323368:434092443409244341685762Clostridium cellulovorans 743B chromosome, complete genomeprophage antirepressor2e-73275
NC_003212:2413824:243981624398162440586771Listeria innocua Clip11262, complete genomehypothetical protein2e-70265
NC_010609:880196:883218883218883991774Lactobacillus reuteri JCM 1112, complete genomephage antirepressor7e-67253
NC_009513:870837:873859873859874632774Lactobacillus reuteri F275, complete genomeprophage antirepressor7e-67253
NC_009332:1269000:130504913050491305810762Streptococcus pyogenes str. Manfredo chromosome, complete genomephage antirepressor protein1e-66253
NC_003485:579946:582257582257583018762Streptococcus pyogenes MGAS8232, complete genomeputative antirepressor1e-66253
NC_009513:1184000:119712311971231197926804Lactobacillus reuteri F275, complete genomephage antirepressor protein5e-66250
NC_014011:1139818:115821711582171158990774Aminobacterium colombiense DSM 12261 chromosome, complete genomeprophage antirepressor2e-63242
NC_009706:1972000:198827419882741989077804Clostridium kluyveri DSM 555 chromosome, complete genomeprophage antirepressor3e-63241
NC_003212:57061:810818108181854774Listeria innocua Clip11262, complete genomehypothetical protein3e-63241
NC_013174:2321000:232849123284912329225735Jonesia denitrificans DSM 20603, complete genomephage antirepressor protein3e-57221
NC_015052:1030708:104657610465761047355780Bifidobacterium longum subsp. infantis 157F, complete genomephage antirepressor5e-57221
NC_017219:1680344:168201016820101682789780Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative phage antirepressor7e-54210
NC_011593:1680215:168222016822201682999780Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,phage antirepressor protein7e-54210
NC_016799:167362:181688181688182506819Corynebacterium diphtheriae 31A chromosome, complete genomeputative anti-repressor protein8e-54210
NC_010655:1606901:163592716359271636721795Akkermansia muciniphila ATCC BAA-835, complete genomeprophage antirepressor5e-45181
NC_014925:578759:586200586200586955756Staphylococcus pseudintermedius HKU10-03 chromosome, completePhage antirepressor protein2e-44179
NC_002758:2101137:212058321205832121338756Staphylococcus aureus subsp. aureus Mu50, complete genomeanti repressor2e-43176
NC_014551:576000:578839578839579609771Bacillus amyloliquefaciens DSM 7, complete genomephage antirepressor [Staphylococcus prophage phiPV83]1e-42173
NC_007929:293709:297109297109297837729Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhage antirepressor protein2e-42172
NC_017353:887581:893259893259894014756Staphylococcus lugdunensis N920143, complete genomeputative anti repressor2e-42172
NC_013450:854790:859860859860860612753Staphylococcus aureus subsp. aureus ED98, complete genomephage anti repressor1e-41169
NC_010079:2102856:212212521221252122877753Staphylococcus aureus subsp. aureus USA300_TCH1516, completepossible bacteriophage antirepressor2e-41169
NC_017337:321155:325741325741326493753Staphylococcus aureus subsp. aureus ED133 chromosome, completePhage antirepressor protein2e-41169
NC_009632:361229:365614365614366366753Staphylococcus aureus subsp. aureus JH1 chromosome, completephage antirepressor protein2e-41169
NC_009487:362475:365544365544366296753Staphylococcus aureus subsp. aureus JH9 chromosome, completephage antirepressor protein2e-41169
NC_017338:2034698:207441120744112075163753Staphylococcus aureus subsp. aureus JKD6159 chromosome, completephage antirepressor protein2e-41169
NC_009487:2148316:216523321652332165982750Staphylococcus aureus subsp. aureus JH9 chromosome, completephage antirepressor protein4e-41168
NC_009632:2148767:216510721651072165856750Staphylococcus aureus subsp. aureus JH1 chromosome, completephage antirepressor protein4e-41168
NC_007622:1842000:188155718815571882306750Staphylococcus aureus RF122, complete genomephage anti-repressor protein4e-41168
NC_017208:694500:707763707763708560798Bacillus thuringiensis serovar chinensis CT-43 chromosome, completehypothetical protein2e-39162
NC_012658:1810640:181229818122981813038741Clostridium botulinum Ba4 str. 657 chromosome, complete genomeantirepressor, phage associated7e-39160
NC_004606:623853:628626628626629354729Streptococcus pyogenes SSI-1, complete genomeputative P1-type antirepressor (phage associated)1e-38159
NC_002737:780857:783634783634784362729Streptococcus pyogenes M1 GAS, complete genomeputative P1-type antirepressor - phage associated1e-38159
NC_012563:2597934:260796126079612608749789Clostridium botulinum A2 str. Kyoto, complete genomephage antirepressor protein2e-38159
NC_008021:779380:782542782542783291750Streptococcus pyogenes MGAS9429, complete genomephage antirepressor protein2e-38159
NC_015558:1389369:140798014079801408705726Streptococcus parauberis KCTC 11537 chromosome, complete genomeputative P1-type antirepressor - phage associated1e-37156
NC_016627:4323370:436118343611834362004822Clostridium clariflavum DSM 19732 chromosome, complete genomeprophage antirepressor1e-36153
NC_015558:1425271:144646214464621447229768Streptococcus parauberis KCTC 11537 chromosome, complete genomephage antirepressor protein2e-36152
NC_009495:2479465:251890425189042519704801Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeBRO family protein6e-36150
NC_009012:1934107:197448919744891975286798Clostridium thermocellum ATCC 27405, complete genomeBRO-like protein1e-35150
NC_021064:816000:817740817740818504765Propionibacterium avidum 44067, complete genomeBro family antirepressor1e-34146
NC_014624:1840209:186105118610511861893843Eubacterium limosum KIST612 chromosome, complete genomeprophage antirepressor2e-33142
NC_013199:845000:847885847885848589705Lactobacillus rhamnosus Lc 705, complete genomephage protein, antirepressor protein2e-30132
NC_008525:1013979:102618110261811026984804Pediococcus pentosaceus ATCC 25745, complete genomeUncharacterized phage-encoded protein3e-30132
NC_015164:3997743:401090140109014011752852Bacteroides salanitronis DSM 18170 chromosome, complete genomeprophage antirepressor1e-28127
NC_003485:1061344:106346110634611064204744Streptococcus pyogenes MGAS8232, complete genomeputative antirepressor1e-27123
NC_015913:1248000:125915312591531259932780Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeprophage antirepressor1e-26120
NC_006582:2944237:298451629845162985238723Bacillus clausii KSM-K16, complete genomephage anti-repressor protein6e-26117
NC_003210:2380419:239645423964542397230777Listeria monocytogenes EGD-e, complete genomehypothetical protein9e-26117
NC_011660:2924397:292850229285022929290789Listeria monocytogenes HCC23 chromosome, complete genomephage anti-repressor1e-25117
NC_011001:2085986:209670520967052097502798Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein6e-25114
NC_014136:329484:367054367054367797744Leuconostoc kimchii IMSNU11154 chromosome, complete genomehypothetical protein9e-25114
NC_014774:1210004:125044412504441251238795Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeprophage antirepressor7e-24110
NC_012121:474144:477436477436478203768Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative antirepressor, phage associated9e-24110
NC_015437:1494777:150309515030951503838744Selenomonas sputigena ATCC 35185 chromosome, complete genomeprophage antirepressor1e-23110
NC_002758:918827:921437921437922216780Staphylococcus aureus subsp. aureus Mu50, complete genomesimilar to anti-repressor2e-23109
NC_009782:920272:922882922882923661780Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein2e-23109
NC_017179:1683199:168852816885281689337810Clostridium difficile BI1, complete genomehypothetical protein1e-22106
NC_010577:1188438:121324012132401214028789Xylella fastidiosa M23, complete genomeprophage antirepressor9e-22103
NC_004556:1178897:120370012037001204488789Xylella fastidiosa Temecula1, complete genomehypothetical protein9e-22103
NC_014774:171500:198615198615199403789Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeprophage antirepressor1e-21103
NC_014738:2094000:212450121245012125250750Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,phage antirepressor protein4e-21101
NC_017045:119046:129750129750130499750Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,phage antirepressor protein4e-21101
NC_015164:3099097:312458831245883125337750Bacteroides salanitronis DSM 18170 chromosome, complete genomeprophage antirepressor4e-2098.2
NC_016809:1778000:178241417824141783043630Haemophilus influenzae 10810, complete genomehypothetical protein2e-1996.7
NC_017351:643674:647068647068647856789Staphylococcus aureus subsp. aureus 11819-97 chromosome, completephage antirepressor KilAC domain protein1e-1996.7
NC_007622:1842000:188313418831341883922789Staphylococcus aureus RF122, complete genomephage anti-repressor protein1e-1996.7
NC_007795:1922000:196176119617611962552792Staphylococcus aureus subsp. aureus NCTC 8325, complete genomebacteriophage L54a, antirepressor, putative1e-1996.7
NC_002951:351029:358916358916359707792Staphylococcus aureus subsp. aureus COL, complete genomeprophage L54a, antirepressor, putative1e-1996.7
NC_011035:541560:560415560415561260846Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative phage associated protein2e-1996.3
NC_004369:868890:880230880230881018789Corynebacterium efficiens YS-314, complete genomehypothetical protein2e-1995.9
NC_014774:1210004:123948712394871240272786Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeprophage antirepressor5e-1994.7
NC_014554:1821320:183285618328561833608753Lactobacillus plantarum subsp. plantarum ST-III chromosome,hypothetical protein1e-1893.6
NC_002946:1020175:104444710444471045292846Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein, putative phage associated protein3e-1892.4
NC_013315:1679000:167955516795551680328774Clostridium difficile CD196 chromosome, complete genomehypothetical protein3e-1892.4
NC_002662:447236:451426451426452181756Lactococcus lactis subsp. lactis Il1403, complete genomeprophage pi1 protein 082e-1892.4
NC_017511:522679:538774538774539100327Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative phage associated protein4e-1892
NC_012985:1191125:228522853073789Candidatus Liberibacter asiaticus str. psy62, complete genomeprophage antirepressor7e-1890.9
NC_012985:1:228522853073789Candidatus Liberibacter asiaticus str. psy62, complete genomeprophage antirepressor7e-1890.9
NC_010320:1268355:127709412770941277885792Thermoanaerobacter sp. X514 chromosome, complete genomeprophage antirepressor6e-1787.8
NC_004606:1107500:114213011421301142849720Streptococcus pyogenes SSI-1, complete genomeputative antirepressor (phage associated)2e-1686.7
NC_003485:296140:298577298577299296720Streptococcus pyogenes MGAS8232, complete genomeputative antirepressor2e-1686.7
NC_004070:747146:753907753907754626720Streptococcus pyogenes MGAS315, complete genomeputative antirepressor - phage associated2e-1686.7
NC_015975:752927:771303771303772091789Lactobacillus ruminis ATCC 27782 chromosome, complete genomeProphage antirepressor1e-1686.7
NC_017337:1107930:111257511125751113288714Staphylococcus aureus subsp. aureus ED133 chromosome, completeprophage, antirepressor, putative3e-1685.9
NC_010674:2856997:287035628703562871099744Clostridium botulinum B str. Eklund 17B, complete genomeantirepressor, phage associated7e-1684.3
NC_009487:921884:925081925081925848768Staphylococcus aureus subsp. aureus JH9 chromosome, completeprophage antirepressor7e-1684.3
NC_009632:921759:924956924956925723768Staphylococcus aureus subsp. aureus JH1 chromosome, completeBRO domain-containing protein7e-1684.3
NC_009012:2927793:293490029349002935646747Clostridium thermocellum ATCC 27405, complete genomeBRO-like protein1e-1583.6
NC_006087:2439252:245342124534212454203783Leifsonia xyli subsp. xyli str. CTCB07, complete genomeprophage antirepressor protein3e-1582
NC_015520:2974048:299950229995023000302801Mahella australiensis 50-1 BON chromosome, complete genomeprophage antirepressor1e-1480.5
NC_007434:1712000:174098017409801741699720Burkholderia pseudomallei 1710b chromosome I, complete sequenceBRO family, N-terminal domain protein5e-1478.2
NC_008258:269806:293814293814294536723Shigella flexneri 5 str. 8401, complete genomeputative DNA-binding protein Roi of bacteriophage BP-933W6e-1477.8
NC_017328:303987:322722322722323444723Shigella flexneri 2002017 chromosome, complete genomeDNA-binding protein Roi2e-1376.3
NC_013361:1558423:157703215770321577754723Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding protein6e-1374.7
NC_011601:1039500:105684210568421057564723Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding protein6e-1374.7
NC_014136:1879049:188225618822561882960705Leuconostoc kimchii IMSNU11154 chromosome, complete genomeputative antirepressor - phage associated7e-1374.3
NC_013364:1183000:120081812008181201540723Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding protein7e-1374.3
NC_002655:1332961:134955513495551350283729Escherichia coli O157:H7 EDL933, complete genomeputative DNA-binding protein Roi of bacteriophage BP-933W8e-1374.3
NC_008530:646207:648241648241649041801Lactobacillus gasseri ATCC 33323, complete genomeUncharacterized phage-encoded protein8e-1374.3
NC_015913:117966:118931118931119551621Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomephage antirepressor1e-1273.6
NC_012658:2525931:254229325422932543156864Clostridium botulinum Ba4 str. 657 chromosome, complete genomeanti-repressor2e-1273.2
NC_013364:3312379:333186433318643332343480Escherichia coli O111:H- str. 11128, complete genome3e-1272
NC_014836:1551965:1564262156426215657971536Desulfurispirillum indicum S5 chromosome, complete genomeBRO domain-containing protein5e-1271.6
NC_018704:176088:194458194458195210753Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein1e-1170.1
NC_015731:1062824:106759210675921067945354Nitrosomonas sp. Is79A3 chromosome, complete genomeprophage antirepressor1e-1170.1
NC_013173:953633:978862978862979515654Desulfomicrobium baculatum DSM 4028, complete genomeprophage antirepressor2e-1169.3
NC_016077:1944000:194682219468221947619798Acidaminococcus intestini RyC-MR95 chromosome, complete genomeprophage antirepressor3e-1168.9
NC_004557:1141558:114155811415581142370813Clostridium tetani E88, complete genomekilA protein, putative phage-related DNA binding protein3e-1168.9
NC_015949:1719575:174530717453071746089783Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomephage antirepressor protein7e-1167.8
NC_014721:729942:739171739171739953783Caldicellulosiruptor kristjanssonii 177R1B chromosome, completephage antirepressor protein7e-1167.8
NC_014219:830966:852587852587853432846Bacillus selenitireducens MLS10 chromosome, complete genomeprophage antirepressor7e-1167.8
NC_014541:1231021:123858012385801239362783Ferrimonas balearica DSM 9799 chromosome, complete genomeprophage antirepressor8e-1167.4
NC_010645:1496816:1513524151352415146481125Bordetella avium 197N, complete genomephage protein2e-1066.6
NC_016629:2784000:279279427927942793540747Desulfovibrio africanus str. Walvis Bay chromosome, completeprophage antirepressor5e-1065.1
NC_014724:1101950:110430011043001105079780Lactobacillus amylovorus GRL 1112 chromosome, complete genomephage-encoded protein1e-0963.9
NC_012559:1685812:169887816988781699522645Laribacter hongkongensis HLHK9, complete genomePhage associated-antirepressor1e-0963.5
NC_000964:2146000:219877621987762199531756Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0963.2
NC_020272:2748733:279414927941492794877729Bacillus amyloliquefaciens IT-45, complete genomeProtein kilA4e-0962
NC_007298:2689731:271017927101792710697519Dechloromonas aromatica RCB, complete genomeBRO, N-terminal1e-0860.1
NC_010612:4837346:4863185486318548642071023Mycobacterium marinum M, complete genomephage antirepressor protein2e-0859.7
NC_017986:5509569:552276155227615523573813Pseudomonas putida ND6 chromosome, complete genomeBRO domain protein2e-0859.7
NC_016642:3286654:329768932976893298555867Pseudovibrio sp. FO-BEG1 chromosome, complete genomeprophage antirepressor2e-0859.3
NC_014664:1614568:163430316343031635073771Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeprophage antirepressor2e-0859.3
NC_010322:3831444:383713438371343837988855Pseudomonas putida GB-1 chromosome, complete genomeprophage antirepressor5e-0858.2
NC_007519:1782067:179635917963591796913555Desulfovibrio alaskensis G20 chromosome, complete genomeprophage antirepressor-like5e-0858.2
NC_007298:3764048:377102537710253771624600Dechloromonas aromatica RCB, complete genomeBRO, N-terminal8e-0857.8
NC_010002:3547958:355748635574863558298813Delftia acidovorans SPH-1, complete genomeprophage antirepressor1e-0757.4
NC_011837:1935294:195039419503941951242849Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-0756.2
NC_010645:406794:409618409618410367750Bordetella avium 197N, complete genomehypothetical protein3e-0755.8
NC_010645:1496816:150123515012351501984750Bordetella avium 197N, complete genomeantirepressor3e-0755.8
NC_012969:1574330:158274215827421583101360Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeprophage antirepressor4e-0755.5
NC_007519:2773000:278776727877672788360594Desulfovibrio alaskensis G20 chromosome, complete genomeprophage antirepressor-like4e-0755.5
NC_008595:771753:792643792643793434792Mycobacterium avium 104, complete genomegp54 protein5e-0755.1
NC_012522:4299287:432161943216194322419801Rhodococcus opacus B4, complete genomehypothetical protein1e-0653.9
NC_014836:1606587:1617241161724116188571617Desulfurispirillum indicum S5 chromosome, complete genomeBRO domain-containing protein1e-0653.9
NC_016812:463000:473558473558474010453Sinorhizobium fredii HH103, complete genomehypothetical protein1e-0653.9
NC_002655:1655944:166116416611641662042879Escherichia coli O157:H7 EDL933, complete genomeputative antirepressor protein encoded by prophage CP-933N9e-0753.9
NC_002695:1571389:157719015771901578068879Escherichia coli O157:H7 str. Sakai, complete genomeputative antirepressor protein9e-0753.9
NC_011353:1513000:151811815181181518996879Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeantirepressor protein9e-0753.9
NC_013008:1513000:151840615184061519284879Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeantirepressor protein encoded by prophage CP-933N9e-0753.9
NC_004129:4333302:434864343486434349527885Pseudomonas fluorescens Pf-5, complete genomeprobable phage protein2e-0653.1
NC_010163:614634:618914618914619660747Acholeplasma laidlawii PG-8A chromosome, complete genomephage proteinputative antirepressor2e-0652.8
NC_009783:1956000:196037119603711961039669Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-0652.8
NC_019842:1172944:117692511769251177584660Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,Protein kilA3e-0652.4
NC_016641:3772981:378173137817313782141411Paenibacillus terrae HPL-003 chromosome, complete genomeanti-repressor5e-0652
NC_017167:1648913:168576016857601686524765Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1prophage antirepressor8e-0650.8