Pre_GI Gene

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Host: NC_013008 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013008:1513000 Escherichia coli O157:H7 str. TW14359 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O157:H7 str. TW14359 was isolated from spinach during the E. coli outbreak in 2006. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15130821513285204hypothetical proteinBLASTP
151333815165803243tail length tape measure proteinQuickGO ontologyBLASTP
15165731516914342minor tail proteinQuickGO ontologyBLASTP
15169141517612699minor tail proteinQuickGO ontologyBLASTP
15176291517883255hypothetical proteinBLASTP
15179931518103111hypothetical proteinBLASTP
15184061519284879antirepressor protein encoded by prophage CP-933NQuickGO ontologyBLASTP
15193381520075738tail component K-like proteinQuickGO ontologyBLASTP
15200721520257186hypothetical proteinBLASTP
152077815227271950non-LEE-encoded type III effectorQuickGO ontologyBLASTP
152390615267192814non-LEE-encoded type III effectorQuickGO ontologyBLASTP
15272621528167906insertion element IS2 transposase InsDQuickGO ontologyBLASTP
15284471528800354IS encoded proteinQuickGO ontologyBLASTP
15290281529303276non-LEE-encoded type III effectorQuickGO ontologyBLASTP
152936415307251362non-LEE-encoded type III effectorQuickGO ontologyBLASTP
15310891531922834spermidineputrescine ABC transporter membrane proteinQuickGO ontologyBLASTP
153193615330721137putrescinespermidine ABC transporter ATPase proteinQuickGO ontologyBLASTP
153332215345481227peptidase TQuickGO ontologyBLASTP
153459715357181122hypothetical proteinBLASTP
15357981535962165hypothetical proteinBLASTP
153596715371961230integrase of prophage CP-933CQuickGO ontologyBLASTP
15375611537749189DNA binding proteinQuickGO ontologyBLASTP
15378071538751945hypothetical proteinBLASTP
15387441538956213hypothetical proteinBLASTP
15389461539410465hypothetical proteinBLASTP
15394031539636234hypothetical proteinBLASTP