Pre_GI Gene

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Host: NC_009495 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009495:2479465 Clostridium botulinum A str. ATCC 3502 chromosome, complete genome

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well-studied Hall strain that produces type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
24794652479587123hypothetical proteinBLASTP
24795802479933354hypothetical proteinBLASTP
247994624816311686tail fiber proteinQuickGO ontologyBLASTP
24816342482269636hypothetical proteinBLASTP
248226624833961131hypothetical proteinBLASTP
24834022483857456hypothetical proteinBLASTP
24838502484182333hypothetical proteinBLASTP
24841662485134969hypothetical proteinBLASTP
24851362485789654hypothetical proteinBLASTP
24858572486375519puattive membrane proteinQuickGO ontologyBLASTP
248642824894092982hypothetical proteinBLASTP
24894102489556147hypothetical proteinBLASTP
24895922490029438hypothetical proteinBLASTP
24900532490463411hypothetical proteinBLASTP
249047624918821407hypothetical proteinBLASTP
24918832492083201hypothetical proteinBLASTP
24920962492917822hypothetical proteinBLASTP
24929202493144225hypothetical protein
24931482493552405hypothetical proteinBLASTP
24935542493940387hypothetical proteinBLASTP
24939412494261321hypothetical proteinBLASTP
24942642494494231hypothetical proteinBLASTP
249455224956041053phage capsid proteinQuickGO ontologyBLASTP
24956182496010393hypothetical proteinBLASTP
24960252496639615hypothetical proteinBLASTP
249691524988761962hypothetical proteinBLASTP
249887625003961521hypothetical proteinBLASTP
250039625017421347terminase large subunitQuickGO ontologyBLASTP
25017352502586852phage terminase small subunitQuickGO ontologyBLASTP
25026332503247615hypothetical protein
25032502503363114hypothetical protein
25036252503822198hypothetical protein
25039052504114210hypothetical proteinBLASTP
25040592504232174hypothetical proteinBLASTP
25044712505004534hypothetical proteinBLASTP
25049852505410426hypothetical proteinBLASTP
25054072505598192hypothetical proteinBLASTP
25056962505911216hypothetical protein
25059282506923996phage integraseQuickGO ontologyBLASTP
25069952507240246hypothetical protein
25074532507947495nitroimidazole resistance proteinQuickGO ontologyBLASTP
25082402508551312hypothetical proteinBLASTP
25085812509351771hypothetical proteinBLASTP
25093922509517126hypothetical protein
25095292510299771hypothetical proteinBLASTP
25103362510965630hypothetical proteinBLASTP
25109532511375423hypothetical proteinBLASTP
25113722511572201hypothetical proteinBLASTP
25116242511986363hypothetical proteinBLASTP
25120042512243240SpoVTAbrB family regulatory proteinQuickGO ontologyBLASTP
25122462512575330hypothetical proteinBLASTP
25125812513534954RNA polymerase sigma factorQuickGO ontologyBLASTP
25135892513822234hypothetical proteinBLASTP
25138422514645804hypothetical proteinBLASTP
25146052515465861hypothetical proteinBLASTP
25154982515698201hypothetical proteinBLASTP
25157682515905138hypothetical protein
25158502516017168BLASTP
25160422516188147hypothetical proteinBLASTP
25161912517048858hypothetical proteinBLASTP
25170602517545486hypothetical proteinBLASTP
25177862517962177hypothetical protein
25180172518271255hypothetical proteinBLASTP
25182792518560282hypothetical proteinBLASTP
25185572518904348hypothetical proteinBLASTP
25189042519704801BRO family proteinQuickGO ontologyBLASTP
25197642519988225DNA-binding phage proteinQuickGO ontologyBLASTP
25201602520594435DNA-binding phage proteinQuickGO ontologyBLASTP
25206052520745141hypothetical protein
25211332521384252DNA-binding phage proteinQuickGO ontologyBLASTP
252138425230031620resolvaseQuickGO ontologyBLASTP