Pre_GI Gene

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Host: NC_015975 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015975:752927 Lactobacillus ruminis ATCC 27782 chromosome, complete genome

Host Lineage: Lactobacillus ruminis; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism was isolated from bovine rumen. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7529277539551029glycosyltransferaseQuickGO ontologyBLASTP
7539527549711020hypothetical proteinBLASTP
755135755368234hypothetical proteinBLASTP
7554887575482061Sulfatase family proteinQuickGO ontologyBLASTP
76429776436872tRNA-GluQuickGO ontology
76465476473683tRNA-TyrQuickGO ontology
76474676481974tRNA-TrpQuickGO ontology
76482576489773tRNA-HisQuickGO ontology
76490476497572tRNA-GlnQuickGO ontology
76500876507871tRNA-CysQuickGO ontology
76513176521585tRNA-LeuQuickGO ontologyBLASTP
765403765603201hypothetical proteinBLASTP
765605765847243transposaseQuickGO ontologyBLASTP
7675827686791098integraseQuickGO ontologyBLASTP
768804769592789hypothetical proteinBLASTP
770469770795327transcriptional regulator phage associatedQuickGO ontologyBLASTP
771034771288255hypothetical proteinBLASTP
771303772091789Prophage antirepressorQuickGO ontologyBLASTP
772103772282180hypothetical proteinBLASTP
772640772837198putative phage-like protein with HTH-domainQuickGO ontologyBLASTP
772849773172324hypothetical proteinBLASTP
773184773501318hypothetical protein
773805773963159hypothetical protein
773968774204237phage-associated proteinQuickGO ontology
774278774643366hypothetical proteinBLASTP
775251775619369putative dnaD domain containing proteinQuickGO ontologyBLASTP