Pre_GI Gene

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Host: NC_009012 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009012:1934107 Clostridium thermocellum ATCC 27405, complete genome

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19341071934982876phosphate ABC transporter inner membrane subunit PstAQuickGO ontologyBLASTP
19349821935836855phosphate ABC transporter inner membrane subunit PstCQuickGO ontologyBLASTP
19359061936760855phosphate ABC transporter binding protein-like proteinQuickGO ontologyBLASTP
193693419385131580BLASTP
19384761938931456RecombinaseQuickGO ontologyBLASTP
193893119404991569RecombinaseQuickGO ontologyBLASTP
19405611940779219hypothetical proteinBLASTP
194083719418411005Peptidoglycan-binding LysMQuickGO ontologyBLASTP
19418381942257420toxin secretionphage lysis holinQuickGO ontologyBLASTP
194234419447672424glycosyl hydrolase-like proteinQuickGO ontologyBLASTP
19448091945384576hypothetical proteinBLASTP
19453941945588195hypothetical proteinBLASTP
194559919481212523phage minor structural proteinQuickGO ontologyBLASTP
19481261948899774phage putative tail componentQuickGO ontologyBLASTP
194891319512012289hypothetical proteinBLASTP
19513351951607273transcriptional regulator AbrB familyQuickGO ontologyBLASTP
19516041952008405Protein of unknown function DUF132QuickGO ontologyBLASTP
19520571952248192hypothetical proteinBLASTP
19522451952628384hypothetical proteinBLASTP
19526311953227597phage major tail protein phi13 familyQuickGO ontologyBLASTP
19532331953577345hypothetical proteinBLASTP
19535741953984411phage protein HK97 gp10 familyQuickGO ontologyBLASTP
19540221954357336phage head-tail adaptor putativeQuickGO ontologyBLASTP
19543601954668309uncharacterized phage proteinQuickGO ontologyBLASTP
195469019558921203phage major capsid protein HK97 familyQuickGO ontologyBLASTP
19559431956671729peptidase S14 ClpPQuickGO ontologyBLASTP
195661019579321323phage portal protein HK97 familyQuickGO ontologyBLASTP
195800919597931785hypothetical proteinBLASTP
195986719614341568BLASTP
19615731961767195hypothetical proteinBLASTP
19617711962238468hypothetical proteinBLASTP
19623001963199900hypothetical proteinBLASTP
19633411963604264hypothetical proteinBLASTP
19635971964289693virulence-related proteinQuickGO ontologyBLASTP
196440619656591254ParB-like nucleaseQuickGO ontologyBLASTP
196566519669631299DNA methylase N-4N-6QuickGO ontologyBLASTP
19671201967671552hypothetical proteinBLASTP
19677921968151360HNH endonucleaseQuickGO ontologyBLASTP
19682731968515243hypothetical proteinBLASTP
19686591969657999Uncharacterized phage-associated protein-like proteinQuickGO ontologyBLASTP
19696971970131435hypothetical proteinBLASTP
19703461970801456conserved hypothetical phage-associated proteinQuickGO ontologyBLASTP
19708931971195303hypothetical proteinBLASTP
197149619740512556hypothetical proteinBLASTP
19740481974473426hypothetical proteinBLASTP
19744891975286798BRO-like proteinQuickGO ontologyBLASTP
197529119772131923DNA-directed DNA polymeraseQuickGO ontologyBLASTP
19772711978023753hypothetical proteinBLASTP