Pre_GI Gene

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Host: NC_009513 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009513:1184000 Lactobacillus reuteri F275, complete genome

Host Lineage: Lactobacillus reuteri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain (JCM 1112, F275) is the type strain for the species. It is a human isolate, which is unable to colonize the intestinal tract of mice. Normal gut bacterium. They are commonly found in the oral, vaginal, and intestinal tracts of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained. These cultures produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also used as a starter molecule for complex organic molecule syntheses. Lactobacillus reuteri is a member of the normal microbial community of the gut in humans and animals. This organism produces antibiotic compounds, such as reutericin and reuterin, which have inhibitory effects on pathogenic microorganisms.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11840241184197174hypothetical proteinBLASTP
11841941184631438hypothetical protein
11846541185127474phage terminase small subunit putative P27 familyQuickGO ontologyBLASTP
11852721185808537HNH endonucleaseQuickGO ontologyBLASTP
11858761186055180hypothetical proteinBLASTP
11867151187173459transposase IS200-family proteinQuickGO ontologyBLASTP
11874461188288843hypothetical protein
11891941189616423hypothetical proteinBLASTP
11896981189841144hypothetical proteinBLASTP
11899041190215312hypothetical proteinBLASTP
11902151190475261hypothetical proteinBLASTP
11904831190671189hypothetical proteinBLASTP
11906711191012342hypothetical proteinBLASTP
11910121191272261hypothetical proteinBLASTP
11912721191466195hypothetical proteinBLASTP
11915101191671162hypothetical proteinBLASTP
11918471192125279hypothetical proteinBLASTP
11922011192572372hypothetical proteinBLASTP
11925691192898330hypothetical proteinBLASTP
11928911193748858primosome DnaD subunitQuickGO ontologyBLASTP
11937531194577825hypothetical proteinBLASTP
11945611195550990RecT proteinQuickGO ontologyBLASTP
11955431195773231hypothetical protein
11960471196553507hypothetical protein
11971231197926804phage antirepressor proteinQuickGO ontologyBLASTP
11979451198148204transcriptional regulator XRE familyQuickGO ontologyBLASTP
11983271198764438helix-turn-helix domain proteinQuickGO ontologyBLASTP
11987771199217441protein of unknown function DUF955QuickGO ontologyBLASTP
11993461199855510protein of unknown function DUF1535QuickGO ontologyBLASTP
12000181200335318hypothetical protein
120033812014681131phage integrase family proteinQuickGO ontologyBLASTP
12015821201968387LSU ribosomal protein L19PQuickGO ontologyBLASTP