Pre_GI: BLASTN Hits

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Query: NC_009513:1184000 Lactobacillus reuteri F275, complete genome

Start: 1184000, End: 1201968, Length: 17969

Host Lineage: Lactobacillus reuteri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain (JCM 1112, F275) is the type strain for the species. It is a human isolate, which is unable to colonize the intestinal tract of mice. Normal gut bacterium. They are commonly found in the oral, vaginal, and intestinal tracts of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained. These cultures produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also used as a starter molecule for complex organic molecule syntheses. Lactobacillus reuteri is a member of the normal microbial community of the gut in humans and animals. This organism produces antibiotic compounds, such as reutericin and reuterin, which have inhibitory effects on pathogenic microorganisms.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009513:87083787083788981818982Lactobacillus reuteri F275, complete genome011870BLASTN svgBLASTP svg
NC_010610:1385066*1385066141573130666Lactobacillus fermentum IFO 3956, complete genome1e-66262BLASTN svgBLASTP svg
NC_015437:23544292354429237706322635Selenomonas sputigena ATCC 35185 chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_015437:227420*22742024509917680Selenomonas sputigena ATCC 35185 chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_015437:10660141066014109667930666Selenomonas sputigena ATCC 35185 chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_015437:697051*69705173429337243Selenomonas sputigena ATCC 35185 chromosome, complete genome4e-20107BLASTN svgBLASTP svg
NC_021175:353292*35329237126317972Streptococcus oligofermentans AS 1.3089, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_009785:1414892*1414892143928524394Streptococcus gordonii str. Challis substr. CH1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_011134:1222739*1222739124792825190Streptococcus equi subsp. zooepidemicus str. MGCS10565, complete2e-1281.8BLASTN svgBLASTP svg
NC_012470:853561*85356188426730707Streptococcus equi subsp. zooepidemicus, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_020164:1590221*1590221161409923879Staphylococcus warneri SG1, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_014393:503230*50323052309919870Clostridium cellulovorans 743B chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_014393:139690*13969016309923410Clostridium cellulovorans 743B chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_014376:3399366*3399366342191022545Clostridium saccharolyticum WM1 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_014376:27663262766326279028923964Clostridium saccharolyticum WM1 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_014376:59700059700063711840119Clostridium saccharolyticum WM1 chromosome, complete genome8e-0660BLASTN svgBLASTP svg
NC_010674:3674739*3674739372221147473Clostridium botulinum B str. Eklund 17B, complete genome8e-0660BLASTN svgBLASTP svg