Pre_GI: BLASTP Hits

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Query: NC_014012:2565329:2572236 Shewanella violacea DSS12, complete genome

Start: 2572236, End: 2572967, Length: 732

Host Lineage: Shewanella violacea; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella violacea DSS12 was isolated from mud, taken at a depth of 5110 m, from the Ryukyu Trench in the Philippine Sea. Shewanella violacea is psychrophilic and barophilic, with an optimum growth temperature and pressure of 8 degrees C and 30 MPa, respectively. This organism is able to grow at pressures from 0.1 MPa to 70Mpa, however, no growth occurs a temperatures above 20 degrees C.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005085:2774370:278815527881552788880726Chromobacterium violaceum ATCC 12472, complete genometype III secretion system apparatus lipoprotein1e-55216
NC_012779:916000:931839931839932570732Edwardsiella ictaluri 93-146, complete genometype III secretion apparatus lipoprotein, YscJ/HrcJ family, putative9e-50196
NC_011083:1476894:149579214957921496541750Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion apparatus lipoprotein, YscJ/HrcJ family4e-44178
NC_006905:1509093:152796515279651528714750Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system apparatus SsaJ4e-44178
NC_011080:1470794:148971714897171490466750Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus lipoprotein, YscJ/HrcJ family4e-44178
NC_011149:1710601:172495817249581725707750Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus lipoprotein, YscJ/HrcJ family4e-44178
NC_003198:1621347:163570416357041636453750Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island lipoprotein3e-44178
NC_004631:1325817:134468313446831345432750Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island lipoprotein3e-44178
NC_011094:1435347:145418114541811454930750Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus lipoprotein, YscJ/HrcJ family protein4e-44177
NC_016860:1469066:148796414879641488713750Salmonella enterica subsp. enterica serovar Typhimurium strneedle complex inner membrane lipoprotein3e-43175
NC_011147:1502096:151645315164531517202750Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island lipoprotein4e-43174
NC_003197:1471349:149027714902771491026750Salmonella typhimurium LT2, complete genomeneedle complex inner membrane lipoprotein4e-43174
NC_006511:1506915:152127215212721522021750Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island lipoprotein4e-43174
NC_011274:1763676:177803317780331778782750Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island lipoprotein6e-43174
NC_011205:1852665:186702218670221867771750Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus lipoprotein, YscJ/HrcJ family4e-43174
NC_011294:1723852:173820917382091738958750Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island lipoprotein4e-43174
NC_016810:1428201:144712914471291447878750Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island lipoprotein4e-43174
NC_016856:1481325:150025315002531501002750Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex inner membrane lipoprotein4e-43174
NC_016857:1428201:144712914471291447878750Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex inner membrane lipoprotein4e-43174
NC_016863:1429516:144844414484441449193750Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex inner membrane lipoprotein4e-43174
NC_010067:1507823:152575715257571526506750Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-42171
NC_016832:1324820:134371613437161344405690Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secretion system apparatus lipoprotein ssaJ3e-41168
NC_012125:2360815:237517223751722375861690Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island lipoprotein4e-41168
NC_010102:1616530:163088716308871631576690Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-41168
NC_017046:1428272:144726014472601447949690Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island lipoprotein3e-40165
NC_016831:1236786:125571012557101256399690Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island lipoprotein4e-40164
NC_013361:5319497:534306153430615343633573Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscJ2e-36152
NC_013353:3669500:370024737002473700819573Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscJ2e-36152
AP010958:3669500:370024737002473700819573Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscJ2e-36152
NC_002695:4584177:461034346103434610915573Escherichia coli O157:H7 str. Sakai, complete genomeEscJ2e-35149
NC_002655:4653160:467932646793264679898573Escherichia coli O157:H7 EDL933, complete genomeescJ2e-35149
NC_011353:4688000:471344747134474714019573Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype III secretion apparatus lipoprotein, YscJ/HrcJ family2e-35149
NC_011601:4096427:412410841241084124680573Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS structure protein EscJ2e-35149
NC_013008:4643825:466948846694884670060573Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system factor2e-35149
NC_013364:3701895:374174937417493742321573Escherichia coli O111:H- str. 11128, complete genomeT3SS structure protein EscJ2e-35149
NC_013941:4470932:449784744978474498419573Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeEscJ2e-35149
NC_007645:3343815:334381533438153344612798Hahella chejuensis KCTC 2396, complete genomeType III secretory pathway, lipoprotein EscJ9e-31133
NC_002678:5139557:515537151553715156210840Mesorhizobium loti MAFF303099, complete genomeNODULATION PROTEIN NOLT2e-27122
NC_017249:8283701:828971882897188290581864Bradyrhizobium japonicum USDA 6, complete genomeRhcJ protein4e-27121
NC_010688:3487000:350844835084483509212765Xanthomonas campestris pv. campestris, complete genomeHrcJ protein3e-24112
NC_011205:3050235:305938730593873060145759Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus lipoprotein, YscJ/HrcJ family1e-23110
NC_011147:2814664:282507828250782825836759Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island 1 effector protein1e-23110
NC_011094:2913500:292220229222022922960759Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus lipoprotein, YscJ/HrcJ family protein1e-23110
NC_010102:2967464:297797829779782978736759Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-23110
NC_006905:2960260:296852329685232969281759Salmonella enterica subsp. enterica serovar Choleraesuis strcell invasion protein; lipoprotein, may link inner and outer membranes1e-23110
NC_011083:2980356:298951029895102990268759Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion apparatus lipoprotein, YscJ/HrcJ family1e-23110
NC_006511:2819128:282954228295422830300759Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpathogenicity 1 island effector protein1e-23110
NC_011080:2982346:299150029915002992258759Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus lipoprotein, YscJ/HrcJ family1e-23110
NC_003197:3005842:301499630149963015754759Salmonella typhimurium LT2, complete genomeneedle complex inner membrane lipoprotein1e-23110
NC_011149:2912219:292352429235242924282759Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus lipoprotein, YscJ/HrcJ family1e-23110
NC_011274:2881306:289046028904602891218759Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity 1 island effector protein1e-23110
NC_011294:2890500:289965528996552900413759Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity 1 island effector protein1e-23110
NC_012125:2938519:294890729489072949665759Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity 1 island effector protein1e-23110
NC_016832:2829767:284016628401662840924759Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-23110
NC_003198:2856596:286701028670102867768759Salmonella enterica subsp. enterica serovar Typhi str. CT18,pathogenicity 1 island effector protein1e-23110
NC_004631:2842453:285286728528672853625759Salmonella enterica subsp. enterica serovar Typhi Ty2, completepathogenicity 1 island effector protein1e-23110
NC_017046:3027161:303631230363123037070759Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion system apparatus1e-23110
NC_016863:2974333:298348629834862984244759Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex inner membrane lipoprotein1e-23110
NC_016860:3029272:303842630384263039184759Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity 1 island effector protein1e-23110
NC_016857:3028421:303757230375723038330759Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex inner membrane lipoprotein1e-23110
NC_016856:3026426:303523330352333035991759Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex inner membrane lipoprotein1e-23110
NC_016831:2867766:287691928769192877677759Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity 1 island effector protein1e-23110
NC_016810:3028421:303757230375723038330759Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system apparatus1e-23110
NC_003919:457482:479630479630480391762Xanthomonas axonopodis pv. citri str. 306, complete genomeHrcJ protein2e-23109
NC_010067:84093:987409874099498759Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-23108
NC_015761:2726000:273522527352252735983759Salmonella bongori NCTC 12419, complete genomepathogenicity 1 island effector protein1e-22106
NC_012660:819381:827789827789828604816Pseudomonas fluorescens SBW25 chromosome, complete genomeputative type III secretion protein5e-2097.8
NC_009439:20545:275242752428342819Pseudomonas mendocina ymp, complete genomeYscJ/HrcJ family type III secretion apparatus lipoprotein5e-1891.3
NC_010694:2138000:216820521682052168984780Erwinia tasmaniensis, complete genomeType III secretion system1e-1686.7
NC_011751:3285646:330342933034293304163735Escherichia coli UMN026 chromosome, complete genomeputative type III secretion system lipoprotein EprK2e-1686.3
NC_002695:3702344:371920437192043719938735Escherichia coli O157:H7 str. Sakai, complete genomeEprK6e-1684.3
NC_002655:3769643:378650437865043787238735Escherichia coli O157:H7 EDL933, complete genomeputative lipoprotein of type III secretion apparatus6e-1684.3
NC_011353:3805819:382360138236013824335735Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype III secretion apparatus lipoprotein EprK6e-1684.3
NC_013008:3761467:377832737783273779061735Escherichia coli O157:H7 str. TW14359 chromosome, complete genomelipoprotein of type III secretion apparatus6e-1684.3
CU928145:3196173:321371132137113214445735Escherichia coli 55989 chromosome, complete genomePutative Type III secretion system lipoprotein EprK2e-1582.8
CU928160:3030324:304786230478623048596735Escherichia coli IAI1 chromosome, complete genomePutative Type III secretion system lipoprotein EprK2e-1582.8
NC_009801:3175714:319325131932513193985735Escherichia coli E24377A, complete genometype III secretion apparatus lipoprotein EprK2e-1582.8
NC_011748:3196173:321371132137113214445735Escherichia coli 55989, complete genomePutative Type III secretion system lipoprotein EprK2e-1582.8
NC_011415:3217796:323533432353343236068735Escherichia coli SE11 chromosome, complete genomeputative lipoprotein of type III secretion apparatus2e-1582.8
NC_011741:3030324:304786230478623048596735Escherichia coli IAI1 chromosome, complete genomeputative Type III secretion system lipoprotein EprK2e-1582.8
NC_013361:3867558:388509638850963885830735Escherichia coli O26:H11 str. 11368 chromosome, complete genometype III secretion system lipoprotein EprK2e-1582.8
NC_013364:3552284:356982835698283570562735Escherichia coli O111:H- str. 11128, complete genometype III secretion system lipoprotein EprK2e-1582.8
NC_014366:2513352:252556525255652526299735Gamma proteobacterium HdN1, complete genomeType III secretion pathway protein3e-1582
CP002185:3167738:318665731866573187391735Escherichia coli W, complete genome5e-1581.6
CP002516:903241:918685918685919419735Escherichia coli KO11, complete genome5e-1581.6
NC_013722:1689125:171059617105961711483888Xanthomonas albilineans, complete genomeprobable xanthomonas secretion apparatus protein5e-1581.3
NC_013961:851044:859553859553860320768Erwinia amylovora, complete genomeLipoprotein PrgK precursor8e-1580.9
NC_012214:2221702:225552622555262256287762Erwinia pyrifoliae Ep1/96, complete genomeType III secretion system4e-1375.1
NC_010468:906957:9224059224059239151511Escherichia coli ATCC 8739, complete genome3e-1272
NC_020064:4125500:414224441422444143014771Serratia marcescens FGI94, complete genometype III secretion apparatus lipoprotein, YscJ/HrcJ family5e-1271.6
NC_013971:1660144:167238916723891673168780Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system lipoprotein9e-1270.5
NC_013961:1622616:163486116348611635640780Erwinia amylovora, complete genomeLipoprotein PrgK precursor9e-1270.5
NC_013353:3474077:349161434916143492150537Escherichia coli O103:H2 str. 12009, complete genome2e-0859.7
AP010958:3474077:349161434916143492150537Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-0859.7
NC_020126:8080574:809283880928388093644807Myxococcus stipitatus DSM 14675, complete genomeYscJ/FliF family type III secretion lipoprotein1e-0756.6
NC_014377:1060000:1073721107372110752741554Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar M-ring protein FliF3e-0755.5
NC_020209:47504:104511104511104900390Pseudomonas poae RE*1-1-14, complete genometype III secretion apparatus lipoprotein RscJ5e-0755.1