Pre_GI Gene

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Host: NC_011205 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011205:3050235 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
30502353050579345hypothetical proteinBLASTP
30507613051678918periplasmic chelated iron-binding protein YfeAQuickGO ontologyBLASTP
30516753052496822chelated iron transport system membrane protein YfeBQuickGO ontologyBLASTP
30524933053353861chelated iron transport system membrane protein YfeCQuickGO ontologyBLASTP
30533443054192849chelated iron transport system membrane protein YfeDQuickGO ontologyBLASTP
30553593056114756transcriptional regulatorQuickGO ontologyBLASTP
30564983057385888AraC family transcriptional regulatorQuickGO ontologyBLASTP
30577303058092363hypothetical proteinBLASTP
30581793058859681oxygen-regulated invasion protein OrgBQuickGO ontologyBLASTP
30588163059394579type III secretion apparatus protein OrgAMxiKQuickGO ontologyBLASTP
30593873060145759type III secretion apparatus lipoprotein YscJHrcJ familyQuickGO ontologyBLASTP
30601423060447306hypothetical proteinBLASTP
30604663060708243type III secretion apparatus needle proteinQuickGO ontologyBLASTP
306073330617971065type III secretion apparatus protein PrgHEprHQuickGO ontologyBLASTP
30622273063156930transcriptional regulator HilDQuickGO ontologyBLASTP
306424730659141668invasion protein regulatorQuickGO ontologyBLASTP
30659323066414483cell invasion proteinQuickGO ontologyBLASTP
306646830680751608effector protein SptPQuickGO ontologyBLASTP
30680863068478393secretion chaperoneQuickGO ontologyBLASTP
30685053068729225hypothetical proteinBLASTP
30688093069057249acyl carrier proteinQuickGO ontologyBLASTP
306907630710882013cell invasion protein SipAQuickGO ontologyBLASTP
307351130752921782cell invasion protein SipBQuickGO ontologyBLASTP
30752953075792498type III secretion low calcium response chaperone LcrHSycDQuickGO ontologyBLASTP
307593030770001071surface presentation of antigens protein SpaSQuickGO ontologyBLASTP
30769873077778792type III secretion apparatus protein SpaRYscTHrcTQuickGO ontologyBLASTP