Pre_GI Gene

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Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:1509093 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
150909315108711779Tetrathionate reductase complex sensory transduction histidine kinaseQuickGO ontologyBLASTP
15108461511466621Tetrathionate reductase complex response regulatorQuickGO ontologyBLASTP
15115131511776264putative cytoplasmic proteinQuickGO ontologyBLASTP
15118721512831960putative inner membrane proteinQuickGO ontologyBLASTP
15130031513731729putative regulatory proteins merR familyQuickGO ontologyBLASTP
15139101514548639Secretion system regulator transcriptonal activator homologous with degUuvrYbvgAQuickGO ontologyBLASTP
151457915173412763Secretion system regulatorSensor componentQuickGO ontologyBLASTP
15177421518143402Secretion system apparatus SsaBQuickGO ontologyBLASTP
151814515196381494Secretion system apparatus SsaCQuickGO ontologyBLASTP
151961915208301212Secretion system apparatus SsaDQuickGO ontologyBLASTP
15208381521080243Secretion system effector SsaEQuickGO ontologyBLASTP
15212891521615327Secretion system effector SseAQuickGO ontologyBLASTP
15216221522212591Secretion system effector SseBQuickGO ontologyBLASTP
15222091522682474Secretion system chaparone SscAQuickGO ontologyBLASTP
152268515241391455Secretion system effector SseCQuickGO ontologyBLASTP
15241551524742588Secretion system effector SseDQuickGO ontologyBLASTP
15247451525161417Secretion system effector SseEQuickGO ontologyBLASTP
15252131525647435Secretion system chaparone SscBQuickGO ontologyBLASTP
15256631526445783Secretion system effector SseFQuickGO ontologyBLASTP
15264421527131690Secretion system effector SseGQuickGO ontologyBLASTP
15271741527440267Secretion system apparatus SsaGQuickGO ontologyBLASTP
15274181527708291Secretion system apparatus SsaHQuickGO ontologyBLASTP
15277201527968249Secretion system apparatus SsaIQuickGO ontologyBLASTP
15279651528714750Secretion system apparatus SsaJQuickGO ontologyBLASTP
15287321529280549putative cytoplasmic proteinQuickGO ontologyBLASTP
15292771529951675Secretion system apparatus SsaKQuickGO ontologyBLASTP
152991715309331017Secretion system apparatus SsaLQuickGO ontologyBLASTP
15309911531359369Secretion system apparatus SsaMQuickGO ontologyBLASTP
153134415333892046Secretion system apparatus SsaVQuickGO ontologyBLASTP
153337915346801302type III secretion system ATPaseQuickGO ontologyBLASTP
15346291535060432Secretion system apparatus SsaOQuickGO ontologyBLASTP
15350411535415375Secretion system apparatus SsaPQuickGO ontologyBLASTP
15353961536364969type III secretion proteinQuickGO ontologyBLASTP