Pre_GI Gene

Some Help

Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:2960260 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29602602960604345putative cytoplasmic proteinQuickGO ontologyBLASTP
29607862961703918iron transporter fur regulatedQuickGO ontologyBLASTP
29617002962521822iron transporter fur regulatedQuickGO ontologyBLASTP
29625182963378861iron transporter fur regulatedQuickGO ontologyBLASTP
29633692964217849iron transporter fur regulatedQuickGO ontologyBLASTP
29644942965249756transcriptional regulatorQuickGO ontologyBLASTP
29656342966521888bacterial regulatory helix-turn-helix proteins araC familyQuickGO ontologyBLASTP
29668662967318453putative cytoplasmic proteinQuickGO ontologyBLASTP
29673152967995681putative flagellar biosynthesistype III secretory pathway proteinQuickGO ontologyBLASTP
29679522968530579putative inner membrane proteinQuickGO ontologyBLASTP
29685232969281759cell invasion protein lipoprotein may link inner and outer membranesQuickGO ontologyBLASTP
29692782969583306cell invasion protein cytoplasmicQuickGO ontologyBLASTP
29696022969844243cell invasion protein cytoplasmicQuickGO ontologyBLASTP
296986929711041236cell invasion proteinQuickGO ontologyBLASTP
29713632972292930regulatory helix-turn-helix proteins araC familyQuickGO ontologyBLASTP
297338429750451662invasion genes transcription activatorQuickGO ontologyBLASTP
29750632975545483cell invasion proteinQuickGO ontologyBLASTP
297559929772301632protein tyrosine phosphateQuickGO ontologyBLASTP
29772172977567351chaparone related to virulenceQuickGO ontologyBLASTP
29776362977896261putative cytoplasmic proteinQuickGO ontologyBLASTP
29779402978188249acyl carrier proteinQuickGO ontologyBLASTP
297820729802642058cell invasion proteinQuickGO ontologyBLASTP
298028329813141032cell invasion proteinQuickGO ontologyBLASTP
298138529826141230cell invasion proteinQuickGO ontologyBLASTP
298264229844231782cell invasion proteinQuickGO ontologyBLASTP
29844262984923498surface presentation of antigens secretory proteinsQuickGO ontologyBLASTP
298506129861311071type III secretion proteinQuickGO ontologyBLASTP
29861182986909792surface presentation of antigens secretory proteinsQuickGO ontologyBLASTP