Pre_GI Gene

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Host: NC_011149 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011149:1710601 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
171060117117491149cyclopropane-fatty-acyl-phospholipid synthaseQuickGO ontologyBLASTP
17117911712432642riboflavin synthase alpha subunitQuickGO ontologyBLASTP
171264917140221374multidrug resistance protein NorMQuickGO ontologyBLASTP
171449517155531059secretion system apparatus protein SsaUQuickGO ontologyBLASTP
17155501716329780type III secretion apparatus protein SpaRYscTHrcTQuickGO ontologyBLASTP
17165931717240648type III secretion apparatus protein YscRHrcR familyQuickGO ontologyBLASTP
17173081718276969type III secretion apparatus protein YscQHrcQ familyQuickGO ontologyBLASTP
17182571718550294secretion system apparatus protein SsaPQuickGO ontologyBLASTP
17186121718989378secretion system apparatus SsaOQuickGO ontologyBLASTP
171899217202931302type III secretion apparatus H-transporting two-sector ATPaseQuickGO ontologyBLASTP
172028317223282046secretion system apparatus SsaVQuickGO ontologyBLASTP
17223131722681369secretion system apparatus SsaMQuickGO ontologyBLASTP
17227391723731993secretion system apparatus protein SsaLQuickGO ontologyBLASTP
17237211724395675type III secretion apparatus protein HrpEYscL familyQuickGO ontologyBLASTP
17243921724664273secretion system apparatusQuickGO ontologyBLASTP
17249581725707750type III secretion apparatus lipoprotein YscJHrcJ familyQuickGO ontologyBLASTP
17257041725967264type III secretion system apparatus proteinQuickGO ontologyBLASTP
17259641726254291type III secretion system protein SsaH familyQuickGO ontologyBLASTP
17262321726447216type III secretion apparatus needle proteinQuickGO ontologyBLASTP
17265411727083543secreted effector proteinQuickGO ontologyBLASTP
17272271728009783secreted effector proteinQuickGO ontologyBLASTP
17280251728459435type III secretion low calcium response chaperone LcrHSycDQuickGO ontologyBLASTP
17285111728666156secreted effector proteinQuickGO ontologyBLASTP
17289301729517588translocation machinery componentQuickGO ontologyBLASTP
172953317309871455translocation machinery componentQuickGO ontologyBLASTP
17309901731463474type III secretion low calcium response chaperone LcrHSycDQuickGO ontologyBLASTP
17314601732050591secretion system effector SseBQuickGO ontologyBLASTP
17326461732888243type III secretion system protein YseE familyQuickGO ontologyBLASTP
173289617340951200type III secretion apparatus protein YscDHrpQ familyQuickGO ontologyBLASTP
173408817355811494type III secretion outer membrane pore YscCHrcC familyQuickGO ontologyBLASTP
173638517391472763secretion system regulatorSensor componentQuickGO ontologyBLASTP